BAC Information

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BAC

Clone NameB6Ng01-344O20
ChromosomeX (Build37)
Map Location 129,038,965 - 129,040,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC245600, EG631264
Downstream geneLOC665846, LOC665850, LOC665854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344O20.bB6Ng01-344O20.g
ACCGA127285GA127286
length1,1951,184
definitionB6Ng01-344O20.b B6Ng01-344O20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactgggagagaaccttggatctggacctgaggcagagactat
ttttgagtattgcttactgactttatcaccatgcagctgcttaaattttc
agtcttaggagtgatgctatccatagttagctgtacccttccacatcaat
catcaatcaagaaaatgcagtatgattctacctacacacatatcttagat
ataaattttcagttgttattccctttactcaaatgaccctagctcatgtc
aagttaacctaaaatctagccaaaaacaccttcttttcctttatcgccta
aagaaaatcaatccacatttgctaattatgtgatttctttatttttatag
ttattttctcacagcataattttagcatgaattaattttcaaatttatcc
actaaagtaatttgtatatcagaatagtctaggtaagttatggaaaaata
gcaacctatcatattcattgttgtttctcatataaattattcacaatttt
ggtataaaataaaatttaatggacagaagatgggaagaatattgatccta
tttcaggaggaatttatgaagtagatttagtgcaggcctagagctaatca
gtaaattaagatattcacttataactgtgaactatactttgagattaatg
atatctaagaaaagatacatgtctacacacagtctctatagctactaaat
aagactatagaaagcagaacctatgcaaatccttctattatatgaataat
tcctgtcataagacagctcactaatttgaaagcattttaagtttttataa
atttataatatgtaccagtaataaagcattactggtacatattatattaa
ttttgcattgttaactcaaacatggagtattactgggaagttagtcttta
aatctaaaacactaaaatctttctctgatattatttattaaaatgtgaat
actttcaaagtactttgattataatcacttgtcacaaccacaccagactg
cggcaatattagggcttgggaaaagagtaacttcaggaatagaaacataa
atggccatgaagaacaatagagatcatgttcaacaaatgtagtctttcta
gcattgggatactacttatgacctttatttctcctacctagtgaaatcca
taatgattatcagcttaacagcagtttcaaaatcctgaacttccc

gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
gtcagggactagacaaggctggcccctttctccctacattttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaact
tgataaacagcttcgatgaagtagctggatataaaataaactcaaacaag
tcaatggcctttttctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggca
tgactctaactaaggaagtgaaagatctgtatgataaaacttcaaatctc
tgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgc
tcatggattggcaggatcaacattgtcaaaatggctaccttgccaaaagc
aatctacagattcaatgcaatccccatcaaaattccaactcaatttttca
acgaattaggaggagaaatttgcaaattcatctggaataacaaaaaacct
aggatagcaaaaactcttctcaaggataaaagaacctctggtggaatcac
catgcctgacctaaagctttactacagagcaattgtgataaaaactgcat
ggtactggtatagagacagacaagtagaccaatggaatagaattgaagac
ccagaaatgaacccacacacctagggtcacttgatcttcgacaagggagc
taaaaccatccagtgtaagaaagacagcattttcaacaaatggtgctggc
acaacttgttgttatcatgtagaagaatgcgaatgatccatactatctcc
ttgtactaagtcaaatctaagtgatcaaggaacttcacaataaaaatcag
aagacactgaactatagagagaaagtggggaaaagccctggaagattggc
cataggaaaaattcctgacgaacgcatggctgtactgttaagaatcggag
aaaattggaaccaaatggaactctaatggtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_129038965_129040169
seq2: B6Ng01-344O20.b_48_1242

seq1  GAATTCAAACTGGGAGAGAACCTTGGATCTGGACCTGAGGCAGAGACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGGGAGAGAACCTTGGATCTGGACCTGAGGCAGAGACTAT  50

seq1  TTTTGAGTATTGCTTACTGACTTTATCACCATGCAGCTGCTTAAATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTATTGCTTACTGACTTTATCACCATGCAGCTGCTTAAATTTTC  100

seq1  AGTCTTAGGAGTGATGCTATCCATAGTTAGCTGTACCCTTCCACATCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGGAGTGATGCTATCCATAGTTAGCTGTACCCTTCCACATCAAT  150

seq1  CATCAATCAAGAAAATGCAGTATGATTCTACCTACACACATATCTTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATCAAGAAAATGCAGTATGATTCTACCTACACACATATCTTAGAT  200

seq1  ATAAATTTTCAGTTGTTATTCCCTTTACTCAAATGACCCTAGCTCATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTTCAGTTGTTATTCCCTTTACTCAAATGACCCTAGCTCATGTC  250

seq1  AAGTTAACCTAAAATCTAGCCAAAAACACCTTCTTTTCCTTTATCGCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACCTAAAATCTAGCCAAAAACACCTTCTTTTCCTTTATCGCCTA  300

seq1  AAGAAAATCAATCCACATTTGCTAATTATGTGATTTCTTTATTTTTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCAATCCACATTTGCTAATTATGTGATTTCTTTATTTTTATAG  350

seq1  TTATTTTCTCACAGCATAATTTTAGCATGAATTAATTTTCAAATTTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTCACAGCATAATTTTAGCATGAATTAATTTTCAAATTTATCC  400

seq1  ACTAAAGTAATTTGTATATCAGAATAGTCTAGGTAAGTTATGGAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGTAATTTGTATATCAGAATAGTCTAGGTAAGTTATGGAAAAATA  450

seq1  GCAACCTATCATATTCATTGTTGTTTCTCATATAAATTATTCACAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTATCATATTCATTGTTGTTTCTCATATAAATTATTCACAATTTT  500

seq1  GGTATAAAATAAAATTTAATGGACAGAAGATGGGAAGAATATTGATCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAAATAAAATTTAATGGACAGAAGATGGGAAGAATATTGATCCTA  550

seq1  TTTCAGGAGGAATTTATGAAGTAGATTTAGTGCAGGCCTAGAGCTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGAGGAATTTATGAAGTAGATTTAGTGCAGGCCTAGAGCTAATCA  600

seq1  GTAAATTAAGATATTCACTTATAACTGTGAACTATACTTTGAGATTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTAAGATATTCACTTATAACTGTGAACTATACTTTGAGATTAATG  650

seq1  ATATCTAAGAAAAGATACATGTCTACACACAGTCTCTATAGCTACTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAAGAAAAGATACATGTCTACACACAGTCTCTATAGCTACTAAAT  700

seq1  AAGACTATAGAAAGCAGAACCTATGCAAATCCTTCTATTATATGAATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATAGAAAGCAGAACCTATGCAAATCCTTCTATTATATGAATAAT  750

seq1  TCCTGTCATAAGACAGCTCACTAATTTGAAAGCATTTTAAGTTTTTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCATAAGACAGCTCACTAATTTGAAAGCATTTTAAGTTTTTATAA  800

seq1  ATTTATAATATGTACCAGTAATAAAGCATTACTGGTACATATTATATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATATGTACCAGTAATAAAGCATTACTGGTACATATTATATTAA  850

seq1  TTTTGCATTGTTAACTCAAACATGGAGTATTACTGGGAAGTTAGTCTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCATTGTTAACTCAAACATGGAGTATTACTGGGAAGTTAGTCTTTA  900

seq1  AATCTAAAACACTAAAATCTTTCTCTGATATTATTTATTAAAATGTGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATCTAAAACACTAAAATCTTTCTCTGATATTATTTATTAAAATGTG-AA  949

seq1  TACTTTCAAAGTACTTTGATTATAATCACTTGTCAACAACCACACCAGAC  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACTTTCAAAGTACTTTGATTATAATCACTTGTC-ACAACCACACCAGAC  998

seq1  TGCGGCAATATTAGGGCTTGGGAAAAAGAGTAACTTCAGGAATAG-AACA  1049
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  TGCGGCAATATTAGGGCTTGGG-AAAAGAGTAACTTCAGGAATAGAAACA  1047

seq1  TAAATGGCCATGAAAGACAAATAGAGATCATG-TCAACAAATGTAAGTCT  1098
      |||||||||||| ||||  ||||||||||||| ||||||||||| |||||
seq2  TAAATGGCCATG-AAGAACAATAGAGATCATGTTCAACAAATGT-AGTCT  1095

seq1  TTCTAGCATTTGGGATAACTAC-TATGACCTTTTATTTCCTCTACCCTAG  1147
      |||||||| ||||||| ||||| ||||||| ||||||||  ||| |||||
seq2  TTCTAGCA-TTGGGAT-ACTACTTATGACC-TTTATTTCTCCTA-CCTAG  1141

seq1  TGAAATATCCATTATTGATTATCAGTTATAACAGCCAGTTTTCAAATACT  1197
      ||||  ||||| || |||||||||| | |||||| ||||||  |||| ||
seq2  TGAA--ATCCA-TAATGATTATCAGCT-TAACAG-CAGTTTCAAAATCCT  1186

seq1  G-ACTTCCC  1205
      | |||||||
seq2  GAACTTCCC  1195


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