BAC Information

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BAC

Clone NameB6Ng01-344P19
ChromosomeX (Build37)
Map Location 151,245,891 - 151,246,489
singlet/doubletsinglet
Overlap genenone
Upstream geneSpin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076, 4930524N10Rik, EG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331
Downstream geneLOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4, LOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344P19.bB6Ng01-344P19.g
ACCGA127331GA127332
length9791,128
definitionB6Ng01-344P19.b B6Ng01-344P19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggagtattaagataccctttccacctcacaaactaatgatta
actgtggatgcagattcctcacaatatttttgtccaaatggcttccctga
atttctcctttacttaccatgtatacagtacaaggcctaggtcttatctt
gcagattctctatctaatgtcttcaatttgtttctagctcccatcttcct
ttgtcatttctatgcttgcagtcccctttttgatggatagagtactcaac
agtcatgtatgatgagatttacattccttttccttctagtgacctcctca
ccctgccttggttggctacatgcacccagcttttcacacaatttttttgg
tgtggtactgttgtcttagacttttcaaaccttatttttaataagggttc
ttaaatgcttcaacttcccttctagcctaccaccaaccataggtagtgga
aaataaatgattaggatatgggggaagtggacttttcagaaatattttgg
gggcaaatctaatctgcattttcagatatatacctgcagtccacttagta
gtgttaggatagcaaacaccaacccgcagttgtggcacaacccactcgaa
acatccagacctctgttgaataggtatgagtcagcaggagctgccaagac
cagcagggatgccaaaagttgtctgctatgtctgccatcttgatgaagtg
aagatctgtggagaagatgtgagaccaacaacgtgttgtaaagggacatc
actgtcagttgagtagtaatttgtactcactccaagtatcacacaggtct
tttcctcagcaaagcaccatgtgaaactgttcttatcaaaactccatgtg
agtttggtcatcactcttgcccaattggccaagtaatgtagaagcagcga
gaaagttctcaagaataactgccagtagtattttcttggtgtttcccttc
taagaagtgccacttatgatgggccatta
gaattcctactaaattccaagctcataggcttcaaggattttctaggacg
ttggaacactcgtggaggcttgcctatgtcagaattcaatctttaaaggc
acttataataaaacaatactgaaagagagcacgtggatccctacaccaga
ctaatgccaggataggatatgagtatacgggttatgagaatgccaatgtt
ccaagaggttgagtttctctgaaaccctttgcctcgtgagtgcttccagg
cctctcggcctgtcaagcagacttcactggagaggacgtagcatttgggt
aatctgtgtcataattttcattgaattccaggatgtctttaatttctttc
tttatttccttcctgacaaaattatcattgagtagagaattgtttagttt
acatgggtatgtgggcattctggtttgttctttttgtttgtttgttcgtt
tttttgttgttgttttgttttttgttattgaagtctagcctttgtctatg
gtggtctgatataatgcatgggattatttcaatcttcttgtatctggtga
ggcttgttttgtgactgtttatatggtcatttttggagaaggtaccatga
gatgcagagaggaagttatatttgatgaaatattatgtatgtatcagtta
aatcaatttggttcataacctcaattagtctttgtgtctctgtttagttt
ctgtttcaatgacctgttacttggtaagagtggagtattgaagtctccta
gtattattgtgtgtttcaatgtgtgttttgagctttaataaagttttgtt
ttatgaatgtgggtgcccttccatttggggcatagatgtttagaattgag
acttttgcttggtagatttttcctgttgtgaatatgaagtgtcctttctc
ccatctttttcatacttttagttgaacatctattttattgacttattaga
gtagatcccatctgtgtctcgggactatttgcctggaagacttttttttc
atccgtttactctgcagtagtgtctgtaattgtcattggaggtgtgtgct
atgtgcagacaaatgcctgatctggtgagggattccagtctgtaggtctt
ctttatggcctgaagaatatttgataag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151245891_151246489
seq2: B6Ng01-344P19.b_49_647 (reverse)

seq1  TCGAGTGGGTTGTGCCACAACTGCGGGTTGGTGTTTGCTATCCTAACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTGGGTTGTGCCACAACTGCGGGTTGGTGTTTGCTATCCTAACACT  50

seq1  ACTAAGTGGACTGCAGGTATATATCTGAAAATGCAGATTAGATTTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTGGACTGCAGGTATATATCTGAAAATGCAGATTAGATTTGCCCC  100

seq1  CAAAATATTTCTGAAAAGTCCACTTCCCCCATATCCTAATCATTTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTTCTGAAAAGTCCACTTCCCCCATATCCTAATCATTTATTTT  150

seq1  CCACTACCTATGGTTGGTGGTAGGCTAGAAGGGAAGTTGAAGCATTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCTATGGTTGGTGGTAGGCTAGAAGGGAAGTTGAAGCATTTAAG  200

seq1  AACCCTTATTAAAAATAAGGTTTGAAAAGTCTAAGACAACAGTACCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTATTAAAAATAAGGTTTGAAAAGTCTAAGACAACAGTACCACAC  250

seq1  CAAAAAAATTGTGTGAAAAGCTGGGTGCATGTAGCCAACCAAGGCAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATTGTGTGAAAAGCTGGGTGCATGTAGCCAACCAAGGCAGGGT  300

seq1  GAGGAGGTCACTAGAAGGAAAAGGAATGTAAATCTCATCATACATGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGTCACTAGAAGGAAAAGGAATGTAAATCTCATCATACATGACTG  350

seq1  TTGAGTACTCTATCCATCAAAAAGGGGACTGCAAGCATAGAAATGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACTCTATCCATCAAAAAGGGGACTGCAAGCATAGAAATGACAAA  400

seq1  GGAAGATGGGAGCTAGAAACAAATTGAAGACATTAGATAGAGAATCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGGGAGCTAGAAACAAATTGAAGACATTAGATAGAGAATCTGCA  450

seq1  AGATAAGACCTAGGCCTTGTACTGTATACATGGTAAGTAAAGGAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGACCTAGGCCTTGTACTGTATACATGGTAAGTAAAGGAGAAATT  500

seq1  CAGGGAAGCCATTTGGACAAAAATATTGTGAGGAATCTGCATCCACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGCCATTTGGACAAAAATATTGTGAGGAATCTGCATCCACAGTT  550

seq1  AATCATTAGTTTGTGAGGTGGAAAGGGTATCTTAATACTCCATGAATTC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTAGTTTGTGAGGTGGAAAGGGTATCTTAATACTCCATGAATTC  599