Query= MSMg01no046_f09.b1 MSMg01no046_f09.b1 CHROMAT_FILE:
MSMg01no046_f09.b1 PHD_FILE: MSMg01no046_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:28 2005
(402 letters)
>mm_chrX_55403835_55404636
Length = 802
Score = 675 bits (349), Expect = 0.0
Identities = 370/377 (98%)
Strand = Plus / Minus
Query: 7 gaattctttgtactctaaagctctattgatccacagccataggggtaagaatttctgctg 66
|||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gaattctttggactttaaagctctattgatccacaaccataggggtaagaatttctgctg 322
Query: 67 aggacagcgcatcccacatctagcaaccttgatcacctagaaaaggatcctgccagcagt 126
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 321 aggacagcgcatcccacatctagcaaccgtgatcgcctagaaaaggatcctgccagcagt 262
Query: 127 gcagagagacttgtctatgtctctctagaagtcgctttcttccaagcgaaagcacatccc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagagagacttgtctatgtctctctagaagtcgctttcttccaagcgaaagcacatccc 202
Query: 187 tgtgatcccagcacttacaaggtcagactgagctacacaacaagaccctgtctcgaacct 246
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgatcccagcacttacaaggtcacactgagctacacaacaagaccctgtctcgaacct 142
Query: 247 ttccttattttccagcatactcctctttgagacttatgcccacctcccttgtccacctct 306
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 141 ttccttattttccagcatactcctctttgggacttatgcccacctcccttgtccacctct 82
Query: 307 tcttctctgtatgttcttcagcggtgaccttgccacttagctctctgagaagaacccaac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tcttctctgtatgttcttcagcggtgaccttgccacttagctctctgagaagaacccaac 22
Query: 367 tcatcagataaacatga 383
|||||||||||||||||
Sbjct: 21 tcatcagataaacatga 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_f09.g1 MSMg01no046_f09.g1 CHROMAT_FILE:
MSMg01no046_f09.g1 PHD_FILE: MSMg01no046_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:28 2005
(406 letters)
>mm_chrX_55234031_55234836
Length = 806
Score = 774 bits (400), Expect = 0.0
Identities = 404/406 (99%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 1 taggccaccttgggtcacagtgagttctaggacaatgtctggtacaatgtaagatcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 taggccaccttgggtcacagtgagttctaggacaatgtctggtacaatgtaagatcctat 262
Query: 61 gttgaaaagacaaaaagaaaaaaaaaaggaaaggaaaaatattctagctaacttgatact 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttgaaaagacaaaaag--aaaaaaaaggaaaggaaaaatattctagctaacttgatact 320
Query: 121 tctatgtcttctggtgtgctggtagctcatgtacaccatcttagatttcctttaagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctatgtcttctggtgtgctggtagctcatgtacaccatcttagatttcctttaagactt 380
Query: 181 aattcaagttaaaatcctatctagattgaaggtctaatcaaatatcacctttcccattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattcaagttaaaatcctatctagattgaaggtctaatcaaatatcacctttcccattaa 440
Query: 241 tttttctttggtctcagcagataggaattttctttcttctgaacattgtttaaatctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttctttggtctcagcagataggaattttctttcttctgaacattgtttaaatctctt 500
Query: 301 tatttatgtgcttatttacttgctaatttactcattcattcaaccatttggtgttttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttatgtgcttatttacttgctaatttactcattcattcaaccatttggtgttttgag 560
Query: 361 accaggtttctctgcaacccctggctgtcctggaatttactctgta 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaggtttctctgcaacccctggctgtcctggaatttactctgta 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
