CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTTTTTACGTTGTTATACTTTCAATTTATATCTTGATGAATCATT
ATCTTCACAGATAGTCCTGACAGTTCTTCAATATTGACAAAAGTAGCAAT
CTTTTTTTTTTTAAGCCTAGATTTTGTTACAACATAATATGCTTAACGCC
ATGCTTTAAAACTGGGGTGTTTGTACAAATTCTAATGAATATCTAAATCA
GTGTCATGGGGTTTAAATTTTCACTGAGACAGAATATCCATCTGAATGTA
GTGAGGTTAATGTGTGGAAGTAACAACTCAGTAAAGTTCTTCCAGTTTAA
GTATGAATATCTTACTTTGAATACTGACTACCACATTAAATGAGGAAGAT
ATAAAGGAAAAGATAAGAAAAGAATAGAAAAAAAAATAGATCAAGGTGGC
AATGTACATAAGCCCAATGCTAGAGATGGAGAGACAGGAAGTTCATTGAG
GCTTGAGACTAGCTCGTAATGCCAATCAGTGAACTTCAGAAACAGTCTTA
CAGAAAAAAATAACATGGACAGTCAATTGTATAAGACATTCCATTCTCCA
CACTGATGACACACGTGCATCCAAACAGATGGACACACACACACAGGCTA
CTCAGACTAGAGAAGCAGTTCAGCGCCTTGGTCAACCATGATCAAGGAAG
G

TCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCATCTGAAGAATACCTAATGGCT
GAGAAGCACCTAAAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGT
AAGATGGAGAATTGACAAATGGGACCTCATGAAACTACAAAGCTTCAGTA
AGGCAAAAGACACCATCAATAAGACAAAAAGGCCACCAACAGATTGGGAA
AGGATCTTTACCTATCCTAAATCAGATAGAGGACTAATATCTAATACATA
TAAAGAGCTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAA
AATGGGGCTCAGAGCTGAACAAAGAATTCTCACCTGAGGAATACCGAATG
GCTGAGAAACACCTGAAAAAATGTTCAGTATCCTTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATCAAAAATTCAGGTGACAGAAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCTTCCACTTTTGGTTGGGTTGCAAACTTGTACAACCACTCTG
GAAATCAGTCTGGTGGTTCCTCGGAAAACTGGACATAGTATTACAGGAGG
ATCCCGCAAAAGCTCTCCTGGGCATATAATCAGAAGATGTTCCAACCGGT

Query= MSMg01no047_o19.b1 MSMg01no047_o19.b1 CHROMAT_FILE:
MSMg01no047_o19.b1 PHD_FILE: MSMg01no047_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:21 2005
         (630 letters)



>mm_chrX_117533163_117534193
          Length = 1031

 Score = 1108 bits (573), Expect = 0.0
 Identities = 592/599 (98%), Gaps = 5/599 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  atttatatcttgatgaatcattatcttcacagatagtcctgacagttcttcaatattgac 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atttatatcttgatgaatcattatcttcacagatagtcctgacagttcttcaatattgac 292

                                                                       
Query: 95  aaaagtagcaatcttttttttttt-aagcctagattttgttacaacataatatgcttaac 153
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 293 aaaagtagcaatcttttttttttttaagcctagattttgttacaacataatatgcttaac 352

                                                                       
Query: 154 gccatgctttaaaactggggtgtttgtacaaattctaatgaatatctaaatcagtgtcat 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gccatgctttaaaactggggtgtttgtacaaattctaatgaatatctaaatcagtgtcat 412

                                                                       
Query: 214 ggggtttaaattttcactgagacagaatatccatctgaatgtagtgaggttaatgtgtgg 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggggtttaaattttcactgagacagaatatccatctgaatgtagtgaggttaatgtgtgg 472

                                                                       
Query: 274 aagtaacaactcagtaaagttcttccagtttaagtatgaatatcttactttgaatactga 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aagtaacaactcagtaaagttcttccagtttaagtatgaatatcttactttgaatactga 532

                                                                       
Query: 334 ctaccacattaaatgaggaagatataaaggaaaagataagaaaagaatagaaaaaaaaa- 392
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 533 ctaccacattaaatgaggaagatataaagggaaagataagaaaagaatagaaaaaaaaaa 592

                                                                       
Query: 393 tagatcaaggtggcaatgtacataagcccaatgctagagatggagagacaggaagttcat 452
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 593 tagatcaaggtggcaatgtacataatcccaatgctagagatggagagacaggaagttcat 652

                                                                       
Query: 453 tgaggcttgagactagctcgtaatgccaatcagtgaacttcagaaacagtcttacagaaa 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgaggcttgagactagctcgtaatgccaatcagtgaacttcagaaacagtcttacagaaa 712

                                                                       
Query: 513 aaaataacatggacagtcaattgtataagacattccattctccacactgatgacacacgt 572
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aaa-taacatggacagtcaattgtataagacattccattctccacactgatgacacacgt 771

                                                                      
Query: 573 gcatccaaacagatggacacacacacaca--ggctactcagactagagaagcagttcag 629
           |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 772 gcatccaaacagatggacacacacacacacaggctactcagactagagaagcagttcag 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space:   633020
Effective search space used:   633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)