MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-048L10
Chromosome	X (Build37)
Map Location	104,392,425 - 104,393,115
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pgk1, Taf9b, 5031408O05Rik, EG333563, LOC622494, Gm784, Cysltr1, EG331493, LOC668490, LOC100042772, LOC100043263, Zcchc5, Gpr23, P2ry10, A630033H20Rik
Downstream gene	Gpr174, LOC668502, LOC622613, LOC385404, Itm2a, 4933401B06Rik, Tbx22, 2610002M06Rik, Gm732
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pgk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18655 MGI:97555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Taf9b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407786 MGI:3039562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5031408O05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331491 MGI:2685621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG333563 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333563 MGI:3644182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC622494 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein pseudo : _no_value

name	Gm784 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333564 MGI:2685630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cysltr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58861 MGI:1926218
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG331493 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331493 MGI:3648285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668490 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins pseudo : _no_value

name	LOC100042772 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100043263 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Zcchc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213436 MGI:2685221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78134 MGI:1925384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	P2ry10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78826 MGI:1926076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630033H20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213438 MGI:2441814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr174 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213439 MGI:2685222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC622613 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC385404 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins pseudo : _no_value

name	Itm2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16431 MGI:107706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933401B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71011 MGI:1918261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Tbx22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245572 MGI:2389465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2610002M06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67028 MGI:1914278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm732 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213450 MGI:2685578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778975 GeneID:18655 MGI:97555
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglycerate kinase 1 transcript_id : NM_008828.2

name	Taf9b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47564075 GeneID:407786 MGI:3039562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_001001176.1

name	5031408O05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376404 GeneID:331491 MGI:2685621
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5031408O05 gene transcript_id : NM_001033424.2

name	EG333563 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51772285 GeneID:333563 MGI:3644182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG333563 transcript_id : XM_285515.3

name	Gm784 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56090555 GeneID:333564 MGI:2685630
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 784, (NCBI) transcript_id : NM_001007580.1

name	Cysltr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388547 GeneID:58861 MGI:1926218
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteinyl leukotriene receptor 1 transcript_id : NM_021476.3

name	EG331493 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359007 GeneID:331493 MGI:3648285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG331493 transcript_id : NM_001033541.2

name	Zcchc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41054991 GeneID:213436 MGI:2685221
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CCHC domain containing 5 transcript_id : NM_199468.1

name	Gpr23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803306 GeneID:78134 MGI:1925384
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 23 transcript_id : NM_175271.3

name	P2ry10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347647 GeneID:78826 MGI:1926076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : purinergic receptor P2Y, G-protein coupled 10 transcript_id : NM_172435.3

name	A630033H20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351977 GeneID:213438 MGI:2441814
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630033H20 gene transcript_id : NM_175442.3

name	Gpr174 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802201 GeneID:213439 MGI:2685222
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 174 transcript_id : NM_001033251.2

name	LOC622613 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407742 GeneID:622613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC622613 transcript_id : XM_887053.2

name	Itm2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51556453 GeneID:16431 MGI:107706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integral membrane protein 2A transcript_id : NM_008409.2

name	4933401B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271860 GeneID:71011 MGI:1918261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4933401B06 gene transcript_id : XM_001479708.1

name	Tbx22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21644588 GeneID:245572 MGI:2389465
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 22 transcript_id : NM_145224.1

name	Tbx22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375618 GeneID:245572 MGI:2389465
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 22 transcript_id : NM_181319.3

name	2610002M06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381786 GeneID:67028 MGI:1914278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610002M06 gene transcript_id : NM_025921.2

name	Gm732 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359829 GeneID:213450 MGI:2685578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 732, (NCBI) transcript_id : NM_001033252.2

name	Pgk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778976 CCDS:CCDS30339.1 GeneID:18655 MGI:97555
definition	GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IDA] [Evidence ISS]; GO:0004689 - phosphorylase kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence ISS] [Evidence IEA]; GO:0016310 - phosphorylation [Evidence ISS] codon_start : 1 product : phosphoglycerate kinase 1 protein_id : NP_032854.2

name	Taf9b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47564076 CCDS:CCDS30340.1 GeneID:407786 MGI:3039562
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005669 - transcription factor TFIID complex [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006352 - transcription initiation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : NP_001001176.1

name	5031408O05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701925 CCDS:CCDS30341.1 GeneID:331491 MGI:2685621
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC331491 protein_id : NP_001028596.1

name	EG333563 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51772286 GeneID:333563 MGI:3644182
definition	codon_start : 1 product : hypothetical protein protein_id : XP_285515.3

name	Gm784 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090556 CCDS:CCDS30342.1 GeneID:333564 MGI:2685630
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : fibronectin domain-containing protein 3c product : hypothetical protein LOC333564 protein_id : NP_001007581.1

name	Cysltr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542449 GeneID:58861 MGI:1926218
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004974 - leukotriene receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : leukotriene D4 receptor; LTD4 receptor; cysteinyl leukotriene 1 receptor product : cysteinyl leukotriene receptor 1 protein_id : NP_067451.2

name	EG331493 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702049 CCDS:CCDS30343.1 GeneID:331493 MGI:3648285
definition	codon_start : 1 note : novel protein containing 7 transmembrane receptor (rhodopsin family) domain product : hypothetical protein B130007I08 protein_id : NP_001028713.1

name	Zcchc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41054992 CCDS:CCDS30344.1 GeneID:213436 MGI:2685221
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger CCHC domain containing 5 product : zinc finger, CCHC domain containing 5 protein_id : NP_955762.1

name	Gpr23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424926 CCDS:CCDS30345.1 GeneID:78134 MGI:1925384
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : P2Y purinoceptor 9 product : G protein-coupled receptor 23 protein_id : NP_780480.1

name	P2ry10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369579 CCDS:CCDS30346.1 GeneID:78826 MGI:1926076
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : purinergic receptor P2Y G-protein coupled 10 product : purinergic receptor P2Y, G-protein coupled 10 protein_id : NP_766023.1

name	A630033H20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425170 GeneID:213438 MGI:2441814
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : novel protein similar to purinergic receptor P2Y G-protein coupled 10 (P2ry10) (A630033H20Rik) product : hypothetical protein LOC213438 protein_id : NP_780651.1

name	LOC622613 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407743 GeneID:622613
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892146.2

name	Gpr174 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701752 CCDS:CCDS30348.1 GeneID:213439 MGI:2685222
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : putative purinergic receptor FKSG79 product : G protein-coupled receptor 174 protein_id : NP_001028423.1

name	Itm2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556454 CCDS:CCDS30349.1 GeneID:16431 MGI:107706
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : integral membrane protein 2A protein_id : NP_032435.2

name	4933401B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271861 GeneID:71011 MGI:1918261
definition	codon_start : 1 product : hypothetical protein LOC71011 protein_id : XP_001479758.1

name	Tbx22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644589 CCDS:CCDS30350.1 GeneID:245572 MGI:2389465
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; T-box transcripttion factor protein 22 product : T-box 22 isoform 1 protein_id : NP_660259.1

name	Tbx22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044451 CCDS:CCDS30351.1 GeneID:245572 MGI:2389465
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; T-box transcripttion factor protein 22 product : T-box 22 isoform 2 protein_id : NP_851836.1

name	2610002M06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229022 GeneID:67028 MGI:1914278
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67028 protein_id : NP_080197.2

name	Gm732 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701758 CCDS:CCDS30352.1 GeneID:213450 MGI:2685578
definition	codon_start : 1 product : hypothetical protein LOC213450 protein_id : NP_001028424.1

name	LOC100042772 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042772
definition	number : 1 pseudo : _no_value

name	LOC100042772 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042772
definition	number : 2 pseudo : _no_value

name	LOC100043263 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043263
definition	number : 1 pseudo : _no_value

name	LOC668502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668502
definition	number : 2 pseudo : _no_value

name	LOC668502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668502
definition	number : 1 pseudo : _no_value

name	LOC622494 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271859 GeneID:622494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : hypothetical LOC622494 pseudo : _no_value transcript_id : XR_034323.1

name	LOC668490 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271824 GeneID:668490
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins product : similar to Zinc finger protein 277 pseudo : _no_value transcript_id : XR_033882.1

name	LOC385404 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271825 GeneID:385404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins product : similar to 60S ribosomal protein L7 pseudo : _no_value transcript_id : XR_033931.1

clone name	MSMg01-492F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204K12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-048L10.T7 (MSMg01no048_l10.b1)	MSMg01-048L10.TJ (MSMg01no048_l10.g1)
ACC	AG278412	AG278413
length	1,272	1,240
length of high quality (start - end)	561 (77 - 637)	699 (88 - 786)
definition	CHROMAT_FILE: MSMg01no048_l10.b1 PHD_FILE: MSMg01no048_l10.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:58 2005	CHROMAT_FILE: MSMg01no048_l10.g1 PHD_FILE: MSMg01no048_l10.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:58 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNAACTATGGGCCTATAGACTCACTAAGGGAGAGGATCCGCGGAATTCTT TGTTTAGCTCTATACCCTTTAATTCTAGGGTTATTTAGTTTTCTGGAGTC CAGCTTCTTGAGTTCTTTGCATATATTGGATATTAGCCCACTCTCAGATC TAGGAATGGTAAAAATCTTTTCCCAATATGTTGGTTGCTTTTTTGTCTTC TTGACAATGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCA TATGTTAATTCTCAATCTTACAGCACAAGCCATTGCTGTTGTGTTCTGGA ATTTTCTCCCTGTGCTCTTATCTTTGAGGCTTTTCCCCACTTTTTCCTCT ATAATTTTCAGTGTCTCTGGTTTTATGTGGTGTTCCTTGATCCTCTTATA CTTGAGGTTTGTACAAGGAGATAAGAATGGATCAATTCGAATTCTTCTAC ATTATAACCTCCAGTTGTGCCAGTAACATTTGTTGAAAAAGCTGTCTTTT TTCCATTGGATGGTTTTAGCTCCTTTGTCAAAGATCAGGTGACCATAGGT GTGTCAGTTCATTTCTGGGCCTTCAATTGTATTCCATTGATCTACCTGCT TGTCACTGTACCAGTACCATGCAGGTTTTATCACAATTGCTCTGTAGTAG AGTATGAGGTCAGGAATGCAGATTCCTCCAGTGCTTTTTGTTGTTGTTGT TTTTCTTTGCTATTTATTCTTCTTCTATTTTTATTTTTCTCTTTTTTTAT TTTTTTCTTTTTTTTTTTTTATTTTCTCTTCTATTTCTTTTTCTTTTCTT CTTTTTTTTTTTTTTTTTTTTCTTTTATTTTATTTTCTTTTTTTTTTTTC TCTTCTTTCTCCTCTTTCTTTTCTTTTTTTTTTTTCTTTTCTTTTTTCTT TTTTTGTTTTCTTTCTTTCTCTTTTTCTTTTTTTGTTTTTTTTTCCTTTC TTTTTCTTCTTTTTTTTTTTCTTCTTCTTTTTTTTTTTTTCTTCTTTATT TTCTATTTTTATTTCTTCTTTACTCATCTTCTCTCTTTTTCTTTCTTTTC TTTTCTTTGTTTCTCTATCTTTTATTTTTTCTTCTTCTTTTTTCTACTTT TATTATATTTTCATAATCTATTTATGTTCATAATTCTATTCTTATTTCTC TATCCTTCACCTCTATACTTATATNTTCTTTTATTATTTTATTTATTATT TTCTTTCTCCTTTTCTCTTCTTTTTCTGTTCCTTTCTTTCTTTTCTCCTC TTTATAATAATTCTCTATCTAC	TATTTTTNNNNNAATCATGTGATGCTGGGGCGCCXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCCTTTAATGCCAGAACTACAGTTCAG TCTCTTGCATACACACGTTACTTCACAACTACCTGTAATTCCAGGTTCAG GGATCCATTGTTGTCATTGGTCTGTGGGCATCAGACAAATATATGGCACA TGCACATACATGCATGTAAAATACATATACAAAAAGCAAGAATAAATTTA AAAACATATGCATGCATGGGTTGTAAATATAATAGTTTTAGAAATTATTA TATGAAACTATACAGTAGTATAATGTATTATTACTTGCTGTGATTTAAAT ATGAATTATAAAAAGTTCAAGGTCATAAACTTTTAAGTTTAGGCACCAGT GTGGCAATGCTTTGATGTATAAAAATCTTTAATAGATAAGGCCCAAGAGA TGTAATTATCTCATGTGGGCATGCCCATAAAATGATTAATGCTATCTGTC AGAAATTTTAGCTTTTGTGGGAATATATATATATATATATATATATATAT ATACATATATATATATATATATGCAGTATATATGCAGGTTGTTATGAAAT AAGACTATCTCACATGACTGAATACCTGTACATTTCACAACTTACTTCTT TTGTTGGTTTAAAATATTGTAATGCAACCAAATGTTTACCCTAGAAAGTA AGTACCATACTGTTTTGACCCTTCCCAGAATTGTGAACCAAGCAAAACTC TTCAAAAAGTATCCAGATTCAAGTATTACAGAAATTCAGAATGGACTGAT ACACTACTATACATAAAAATTAGCATACTTTCCTATGAGTAGAATATAGT AAAATCAAAGCATGGAAACTGAACGTTCTTTAACACTTTGGCGTTTTATG GAAAGTTCTAAGATGTGACTTTTATGAAAGCAAAAGAAATCATATTGTTT GTTCCCCCTATTAGGGTTGCAGATCCCTTTTAACTCCTCGGTTACTTTCT CTAGCTCCTCCACTGGCGGTCCTGTGAATCCATCCAAAAACTGACTTGGG ACCATCCCCTTCTGGGTTTGCTTAGCCCCACACTTAATTTCCTCAATAAA CAACTTATATTCGGGGCTTTTTCCCATAATTCTTGTATAGGAAATAAAGG GGTCCACGTTTTTATAACTTAAATTTGTATGGATTTTCTATCTCTCTAAT AGACTCTCCTTTTCTTCCCCCATAAAATTTTTTTTCTTAT
quality values	Open. Hide. 0 0 3 6 6 7 7 12 10 11 11 8 8 8 8 10 8 9 12 14 21 23 13 12 8 8 8 15 21 39 39 39 37 33 33 33 33 33 37 37 37 32 28 26 26 29 41 37 41 42 42 42 31 28 29 28 28 30 33 21 21 14 14 11 11 11 10 8 8 6 6 6 8 9 9 10 10 16 26 37 37 53 53 53 53 38 38 38 37 50 50 53 53 53 50 57 53 53 50 50 54 23 28 12 15 15 19 23 27 24 31 42 42 42 42 25 24 15 14 14 15 15 27 32 48 57 68 68 68 68 68 68 57 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 57 57 52 57 57 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 57 57 57 59 57 57 57 57 57 57 68 68 68 68 68 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 44 44 35 35 35 43 43 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 52 52 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 62 62 34 32 13 12 12 12 33 12 15 24 38 43 62 68 68 68 68 57 59 59 59 59 59 59 57 57 57 57 57 57 57 44 43 29 31 32 34 18 14 14 14 18 38 38 59 59 59 52 43 42 43 43 52 57 59 59 59 59 59 57 57 59 59 59 68 59 59 59 59 59 57 54 57 34 34 11 11 11 27 27 59 59 59 52 52 52 52 52 52 59 59 50 50 48 57 44 50 43 43 50 57 57 59 59 43 43 47 59 59 59 59 57 57 43 59 59 57 39 39 39 43 39 41 43 59 59 59 59 57 57 48 57 57 57 59 59 44 32 30 28 30 30 41 41 32 30 30 41 41 47 59 59 43 43 39 39 47 35 35 39 59 43 43 28 21 20 26 27 43 43 48 50 50 48 57 39 32 21 15 12 11 18 19 21 21 30 25 30 37 36 36 39 43 40 41 39 37 37 32 28 28 37 37 42 42 44 43 43 43 43 59 59 42 37 20 20 22 26 26 29 24 28 20 20 21 32 28 35 21 26 11 11 11 17 17 10 10 10 22 21 36 30 25 25 18 23 11 12 11 23 15 21 22 18 12 10 9 9 9 9 9 9 9 9 19 19 10 8 8 10 10 10 10 17 19 20 20 18 11 9 9 10 10 10 12 24 22 32 26 10 10 10 14 10 10 24 30 23 23 11 11 12 18 14 14 10 10 10 8 9 9 15 8 10 8 10 12 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 9 10 11 15 15 12 8 8 8 6 6 8 8 9 10 13 9 9 9 10 10 10 8 7 7 7 8 10 9 8 8 19 16 12 10 10 13 18 11 13 9 9 10 8 8 8 6 6 8 8 8 10 9 10 11 10 10 10 8 8 8 9 9 8 8 6 6 8 8 8 8 9 8 11 11 9 9 9 10 10 15 18 12 12 10 16 24 9 10 10 10 10 12 10 10 10 10 15 15 11 11 11 13 11 10 10 10 16 16 18 15 13 11 12 15 13 14 13 10 8 8 8 8 8 10 10 8 9 9 10 10 8 8 8 11 8 8 8 8 12 9 10 10 13 10 10 12 11 13 13 13 8 8 6 6 8 8 10 10 10 10 17 19 16 15 11 13 10 10 10 10 13 17 9 9 9 12 10 8 8 8 8 10 11 11 11 8 8 8 8 8 10 8 8 8 10 8 14 12 11 10 12 9 9 9 17 16 19 11 13 12 14 8 8 6 6 8 10 13 13 14 14 10 11 10 15 11 11 12 12 9 9 10 13 12 10 10 12 10 10 14 14 10 10 7 6 8 8 10 19 17 11 9 9 10 8 12 10 12 7 7 8 8 8 8 6 6 8 8 13 10 10 10 10 10 11 6 8 6 6 8 8 9 9 6 8 6 6 13 6 8 8 6 6 6 8 10 8 8 8 8 8 13 13 12 14 9 9 10 10 10 10 8 8 9 13 15 8 6 6 10 10 8 10 10 15 8 9 9 20 10 8 8 6 6 8 8 9 9 9 8 8 8 9 8 8 8 6 6 6 10 8 11 9 12 12 9 10 8 10 13 13 10 8 8 9 8 11 10 12 9 9 8 8 8 8 8 8 9 9 9 10 9 8 8 8 8 8 6 6 10 6 6 8 8 8 9 11 12 12 13 15 12 12 12 11 11 11 16 14 14 10 10 11 9 9 10 8 8 6 6 6 6 8 10 8 8 8 8 8 8 8 9 9 8 10 8 9 8 8 8 10 3 0 3 6 7 10 10 8 8 8 8 6 12 12 16 19 16 13 8 10 8 8 10 8 6 8 10 10 6 7 7 12 8 8 8 8 10 10 10 10 8 8 7 7 8 8 8 8 8 12 15 10 10 9 8 8 7 6 8 8 8 8 8 8 10 11 10 7 7 9 7 7 7 8 6 9 12 12 11 8 10 8 8 8 8 10 6 9 9 7 7 6 8 8 8 15 10 9 9	Open. Hide. 8 8 8 8 8 8 3 0 0 0 0 0 3 6 6 6 6 6 6 6 6 6 6 6 8 6 6 6 6 9 9 12 9 7 9 8 10 9 17 17 15 8 8 10 21 19 22 10 14 19 28 35 35 36 37 37 36 28 28 28 34 36 38 36 53 50 50 50 50 47 27 21 9 9 10 10 11 15 12 11 11 9 9 9 10 11 10 18 26 32 37 47 35 35 53 38 38 38 50 43 43 42 42 47 53 53 53 36 33 33 33 29 21 10 9 9 8 8 8 8 15 13 29 26 37 36 29 25 21 21 22 24 23 23 35 42 42 42 53 53 53 50 50 57 53 53 53 53 57 54 54 57 57 54 50 68 68 53 68 68 68 68 50 50 47 50 50 51 57 57 57 57 57 43 43 32 25 25 44 44 59 57 48 48 48 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 44 44 35 35 35 59 59 68 68 68 68 68 68 57 57 52 52 52 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 68 68 57 57 52 52 52 62 62 62 62 68 68 68 44 44 35 31 31 43 43 52 52 62 62 68 68 68 68 62 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 39 41 39 47 44 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 43 43 31 31 31 44 44 44 35 26 39 23 23 21 21 43 43 68 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 68 68 62 62 62 62 52 62 62 62 52 62 62 62 62 68 33 33 21 13 14 38 38 43 62 43 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 59 59 57 52 57 57 57 57 68 68 68 59 41 32 17 32 36 44 44 68 59 59 59 57 28 28 15 20 23 41 44 68 68 68 44 44 29 29 29 43 44 59 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 52 52 52 59 59 68 68 44 44 34 34 34 44 44 68 68 68 59 59 59 32 24 13 15 15 32 32 57 59 59 59 59 59 59 59 68 68 68 44 44 30 30 33 44 34 42 32 30 30 42 44 59 59 59 57 48 48 41 34 22 24 17 34 34 54 54 27 24 10 12 12 27 32 59 68 68 68 59 59 59 59 59 59 59 57 57 57 57 57 57 59 57 48 48 48 48 50 59 59 59 59 59 44 44 44 39 39 44 44 44 47 41 59 46 48 48 59 59 59 59 48 48 47 46 43 43 39 43 42 42 42 38 47 48 48 32 32 20 28 28 41 39 44 39 37 36 39 39 41 47 47 47 47 47 39 39 39 39 39 39 37 37 37 37 37 37 37 37 37 37 37 39 39 24 27 24 28 20 32 34 41 40 43 40 40 40 30 30 30 25 19 16 23 22 27 24 29 32 30 26 17 24 18 26 26 47 37 37 25 30 17 15 24 30 24 30 30 59 39 37 37 37 37 37 37 28 22 22 25 30 22 19 11 13 11 9 8 9 9 9 14 16 37 37 30 28 23 34 34 48 48 48 57 48 28 28 13 13 13 19 21 34 31 33 22 25 12 12 12 19 21 14 16 20 34 21 26 24 20 18 15 24 14 15 15 19 13 9 11 13 14 15 10 10 13 20 22 9 9 9 9 13 13 17 22 17 10 10 10 10 10 10 9 9 9 14 10 18 19 23 18 22 16 13 10 8 8 8 10 10 11 12 14 17 10 11 10 10 10 8 8 8 8 8 8 8 10 10 12 14 12 15 19 13 13 10 10 11 18 17 20 22 22 24 18 18 16 12 13 10 13 8 8 8 10 10 8 8 8 8 11 10 13 11 13 13 18 13 12 10 10 9 6 8 6 6 8 8 9 11 11 15 18 11 10 8 8 8 8 8 10 10 17 16 13 10 10 10 15 15 22 24 22 22 25 13 12 9 10 9 9 9 9 9 9 10 11 8 8 8 10 9 8 10 10 8 10 11 8 8 10 8 8 8 9 6 8 8 8 6 7 13 12 15 13 9 9 9 9 8 9 13 8 10 8 8 8 10 19 26 15 15 12 15 11 11 11 14 10 6 6 6 6 6 8 10 12 8 8 8 8 9 10 10 10 10 10 10 10 10 9 8 8 8 8 8 8 6 6 8 7 11 17 9 8 8 8 8 9 8 8 8 10 10 8 11 10 10 6 8 7 6 6 8 8 8 10 9 9 6 8 6 6 6 8 9 11 11 9 8 8 8 8 8 15 10 9 8 8 8 6 8 8 8 8 8 8 10 6 9 10 8 8 8 8 8 8 9 9 9 9 10 8 8 8 8 9 8 8 6 6 8 8 6 8 13 12 8 8 8 8 8 8 9 9 9 9 10 10 8 8 8 8 8 8 8 8 8 12 11 11 11 11 11 11 12 11 11 12 8 8 8 8 12 9 10 8 8 10 12 10 8 8 8 8 10 6 9 8 8 10 9 9 8 8 8 9 9 9 12 12 13 8 8 10 15 13 10 10 9 7 11 8 8 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no048_l10.g1 MSMg01no048_l10.g1 CHROMAT_FILE:
MSMg01no048_l10.g1 PHD_FILE: MSMg01no048_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:58 2005
         (699 letters)



>mm_chrX_104392225_104393323
          Length = 1099

 Score = 1270 bits (657), Expect = 0.0
 Identities = 685/699 (97%), Gaps = 8/699 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactacagttcagtctcttgcatacacacgttacttcacaactacctgtaattccaggtt 60
           |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||
Sbjct: 201 aactacagttcagtctcttgcatacacatggaacttcacaactacctgtaactccaggtt 260

                                                                       
Query: 61  cagggatccattgttgtcattggtctgtgggcatcagacaaatatatggcacatgcacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggatccattgttgtcattggtctgtgggcatcagacaaatatatggcacatgcacat 320

                                                                       
Query: 121 acatgcatgtaaaatacatatacaaaaagcaagaataaatttaaaaacatatgcatgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgcatgtaaaatacatatacaaaaagcaagaataaatttaaaaacatatgcatgcat 380

                                                                       
Query: 181 gggttgtaaatataatagttttagaaattattatatgaaactatacagtagtataatgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggttgtaaatataatagttttagaaattattatatgaaactatacagtagtataatgta 440

                                                                       
Query: 241 ttattacttgctgtgatttaaatatgaattataaaaagttcaaggtcataaacttttaag 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattccttgctgtgatttaaatatgaattataaaaagttcaaggtcataaacttttaag 500

                                                                       
Query: 301 tttaggcaccagtgtggcaatgctttgatgtataaaaatctttaatagataaggcccaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttaggcaccagtgtggcaatgctttgatgtataaaaatctttaatagataaggcccaag 560

                                                                       
Query: 361 agatgtaattatctcatgtgggcatgcccataaaatgattaatgctatctgtcagaaatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgtaattatctcatgtgggcatgcccataaaatgattaatgctatctgtcagaaatt 620

                                                                       
Query: 421 ttagcttttgtgggaatatatatatatatatatatatatatatatacatatatatatata 480
           ||||||||||||||||||||||||||||||||||||||||||||||        ||||||
Sbjct: 621 ttagcttttgtgggaatatatatatatatatatatatatatatata--------tatata 672

                                                                       
Query: 481 tatatgcagtatatatgcaggttgttatgaaataagactatctcacatgactgaatacct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tatatgcagtatatatgcaggttgttatgaaataagactatctcacatgactgaatacct 732

                                                                       
Query: 541 gtacatttcacaacttacttcttttgttggtttaaaatattgtaatgcaaccaaatgttt 600
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtacatttcataacttacttcttttgttggtttaaaatattgtaatgcaaccaaatgttt 792

                                                                       
Query: 601 accctagaaagtaagtaccatactgttttgacccttcccagaattgtgaaccaagcaaaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 accctagaaagtaagtaccatactgttttgacccttcccagaattgtgaaccaagcaaaa 852

                                                  
Query: 661 ctcttcaaaaagtatccagattcaagtattacagaaatt 699
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ctcttcaaaaagtatccagattcaagtattacagaaatt 891



 Score = 74.2 bits (38), Expect = 3e-17
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 438 atatatatatatatatatatatatatatacatatatatatat 479
           ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 677 atatatatatatatatatatatatatatatatatatatatat 636



 Score = 74.2 bits (38), Expect = 3e-17
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 436 atatatatatatatatatatatatatatatacatatatatat 477
           ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 677 atatatatatatatatatatatatatatatatatatatatat 636


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 5
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information