Query= MSMg01no050_f17.b1 MSMg01no050_f17.b1 CHROMAT_FILE:
MSMg01no050_f17.b1 PHD_FILE: MSMg01no050_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:33 2005
(213 letters)
>mm_chrX_96474789_96475401
Length = 613
Score = 373 bits (193), Expect = e-108
Identities = 208/213 (97%)
Strand = Plus / Plus
Query: 1 tttgcagaccgaattctgcagctacctcagctctatgccagcaggccactgttcccttcc 60
||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||
Sbjct: 201 tttgcagactgaattctgcagccacctcagctctatgccagcagaccactggtcccttcc 260
Query: 61 caaccggggcttgcctttgcctgcctccaccttggaagtggtcaagtggattcacatgct 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatcggggcttgcctttgcctgcctccaccttggaagtggtcaagtggattcacatgct 320
Query: 121 caaacttccacgcattacatctgtgcagaaaggttaagtgcttaaggggaaaaaagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacttccacgcattacatctgtgcagaaaggttaagtgcttaaggggaaaaaagaaaa 380
Query: 181 agctttaagacaggacctcttcatatatcccag 213
|||||||||||||||||||||||||||||||||
Sbjct: 381 agctttaagacaggacctcttcatatatcccag 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no050_f17.g1 MSMg01no050_f17.g1 CHROMAT_FILE:
MSMg01no050_f17.g1 PHD_FILE: MSMg01no050_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:33 2005
(183 letters)
>mm_chrX_96643547_96644130
Length = 584
Score = 333 bits (172), Expect = 5e-96
Identities = 181/184 (98%), Gaps = 1/184 (0%)
Strand = Plus / Minus
Query: 1 tttcttc-agaaacttgagggtcaaggggcagagagtttattgtttgtggcctctgacgc 59
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 tttcttcaagaaacttgagggtcaaggggcagagagtttagtgtttgtggcctctgacgc 325
Query: 60 taagtttcagagacagagtttggatggcctaggtgcatgtactattgggcctcttttccc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 taagtttcagagacagagtttggatggcctaggtgcatgtactattgggcctattttccc 265
Query: 120 tagggacttttgggttttttgtttgtttgttttgttttattttggttttggtttttcgag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagggacttttgggttttttgtttgtttgttttgttttattttggttttggtttttcgag 205
Query: 180 acag 183
||||
Sbjct: 204 acag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 584
Length adjustment: 8
Effective length of query: 175
Effective length of database: 576
Effective search space: 100800
Effective search space used: 100800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
