CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGAATCTCGACTCCAAAAAAAAAAAAAAAGAAAAAAAAAGAAAC
ACAATCTAATGAAAAAATGAGCTCTAAAGCTAAACAAAATTCTCAATTTA
GGAATCTCAAAATCCTGAGAAGCACCTAAAGAAATGTTCAACATCCTCAT
TTATAGTGAAATACAAATCAAAACCACGCTGAGATTCCATCCTAAACCAA
TCAGAATGGTTGAGACCAAAATGTCAGGTGAAAATAGCTGCTAGAGCAAA
TGTAGATAAAAAAGAACACTTTATCTTTGCTAGTGGGATTGCAAAGTGTT
TTCCAGATTCCATAATCTGGAAAATATTCTGGCATTTCTTCACAAAATTG
TAAATAAGTCTATCTGAATATTCATATATACAACTTCTGGGCATATACCC
CAAAATGCTCTACCATATCATGAGTAAACCTTCAGTGTTTACAGCAGCCT
TAACTATAATAGCGGGGGTTCAGGGACTATGCCGAATTTAGGAAATTAAT
CTGAACAGGTAATAGAGTGCACCACAGAACCAGACAGCTTCTGGGACAGG
CCGAGCCACAGAACCGCTGAGGCAGCACACTTTTCGGGCCATAGAAAGCC
AGCCACCCTCCCAACCAAAGGACAGGTATCTGCCTGGNTCGGAAGGCC

CCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTACCTCCTCTGGTAGTTTGGGT
CCCGATATTTATCACATTATACTCAAGGCAGGATTTTATTCTTACAGTAA
TGCTATCTGCCTGTGCTTAACCTTCTGACTACTAAACACCTTGTTCAGAA
CAGTGGAGTGACCCAAAAGCCTCAGTTACATAGCAATTGTTGCCTTATGA
ATTTGTATACATGCCTGATTATATTGAAGATTCAAATTCAATTAAATGGT
TTTACCTCAAGGTAGAAAGGCACCTACTTTTGATATAAAACAAATTCCAC
AGTAGATCAGTTCTAAAACTAAAATAATCTGCATGATATCTCAGCACTAA
TGAGTAGGCAGTGAGACAAGGAAAGCAAGAGGAAGAGGCAGACACAGATG
CAGAGGCAGAGGTTCAGATGCAGACTGAGGTAGTAAATGAAAAAGCAGAA
AAAGAAGGACAGGCAGAGTCATAGGGACAGCCATAGGAAGATTCAGGATC
ATAGAGAAGGTCAGAATGTGTAATTTACATGTGCCTGATGTGTGTCATTC
TAATTCTTGAAACTTTTAGGAACTTACATTAATTCAAGTGTCCTGAGAGA
TGGGGTGATTCCTTGTAACAAAATTATCAGATTGCAACCAGTATACCTAA
N

Query= MSMg01no054_n20.g1 MSMg01no054_n20.g1 CHROMAT_FILE:
MSMg01no054_n20.g1 PHD_FILE: MSMg01no054_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:09 2005
         (616 letters)



>mm_chrX_51379207_51380223
          Length = 1017

 Score =  342 bits (177), Expect = 4e-98
 Identities = 462/575 (80%), Gaps = 57/575 (9%)
 Strand = Plus / Plus

                                                                       
Query: 76  gctatctgcctgtgcttaaccttctgactactaa--acaccttgttcagaacagtggagt 133
           |||||||| || ||||||||||||||  ||  ||  |||  |||||||||||||||||||
Sbjct: 272 gctatctgtctatgcttaaccttctggtta--aaagacagtttgttcagaacagtggagt 329

                                                                       
Query: 134 gaccca--aa----agcctcagttacatagcaattgttgccttatgaattt-gtatacat 186
           |||  |  ||    ||   |||||||||||||||| ||||| ||||||||| | ||||||
Sbjct: 330 gactgatgaatgtcag--acagttacatagcaatttttgccctatgaatttgggatacat 387

                                                                       
Query: 187 gc-ctgattatattgaagattcaaattcaattaaatggttttacct-caaggtagaaagg 244
            | ||||||||||||||||||||||||||||||||||||||||| | |||| |||| |||
Sbjct: 388 -ctctgattatattgaagattcaaattcaattaaatggttttac-tacaagatagagagg 445

                                                                       
Query: 245 cacctacttttgatataaaacaaattccacagtagatcagttctaaaactaaaat-aatc 303
            | ||| | ||||| |||||||||||||||||||||||| ||||||||||||| | ||||
Sbjct: 446 aaactagtgttgatgtaaaacaaattccacagtagatcaattctaaaactaaa-tgaatc 504

                                                                       
Query: 304 tgcatgatatctcagcactaatgagtaggcagtgagacaaggaaag-caagaggaagagg 362
           |||||| ||||||||||||| | ||||||||||| |||||| |||| || ||||||||||
Sbjct: 505 tgcatgctatctcagcactacttagtaggcagtgggacaagcaaaggca-gaggaagagg 563

                                                                       
Query: 363 cagacacagatg-cagaggcaga--------------ggttcagatgcagactgaggtag 407
           ||||  ||| || ||||||||||              ||||||| | ||| |    ||||
Sbjct: 564 cagaggcag-tggcagaggcagacacagagatagagaggttcaggtacaggc----gtag 618

                                                                       
Query: 408 -taaatgaa---aaag-cagaaaaagaaggacaggcagagtcatagggacagccatagga 462
            || | |||   | || |||||||||||||| ||||||||||| | || ||| |||||| 
Sbjct: 619 ataga-gaatttagaggcagaaaaagaaggagaggcagagtcacaaggccagtcataggg 677

                                                                       
Query: 463 agattcaggatcatagaga-ag-gtcagaatgtgtaatttacatgtgcctgatgtgtgtc 520
           |||||| ||||||  |||| || ||||||||||||  | | | |||||||| ||||||||
Sbjct: 678 agattccggatca--gagacagtgtcagaatgtgtggtctgcgtgtgcctggtgtgtgtc 735

                                                                       
Query: 521 attctaattcttgaaactttt-aggaacttacattaattcaagtgtcct--gagagatgg 577
            || |||| |||| ||||||| || || |||||||||||||||||||||  ||| | |||
Sbjct: 736 tttgtaatgcttggaacttttcag-aagttacattaattcaagtgtcctttgag-g-tgg 792

                                              
Query: 578 ggtgattccttgtaacaaaattatcagattgcaac 612
            ||||||  ||| ||||||||| | ||||||||||
Sbjct: 793 tgtgattggttgcaacaaaattcttagattgcaac 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space:   610242
Effective search space used:   610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)