Query= MSMg01no054_o16.b1 MSMg01no054_o16.b1 CHROMAT_FILE:
MSMg01no054_o16.b1 PHD_FILE: MSMg01no054_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:12 2005
(653 letters)
>mm_chrX_111274021_111275073
Length = 1053
Score = 1189 bits (615), Expect = 0.0
Identities = 639/649 (98%), Gaps = 4/649 (0%)
Strand = Plus / Plus
Query: 9 gaattcatgctttgcaatttaaacctaatcccaaatgcatgcttagagagtataggtcct 68
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcatgcttggcaatttaaacctaatcccaaatgcatgcttagagagtataggtcct 268
Query: 69 agggtgtaaccaaataatgtgatttttgtcaaatggtcatgttgaaaagtttctttatta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agggtgtaaccaaataatgtgatttttgtcaaatggtcatgttgaaaagtttctttatta 328
Query: 129 atctgtatctttatatcagaagaggtcagcagctttctttttctgccatagacagc---- 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atctgtatctttatatcagaagaggtcagcagctttctttttctgccatagacagctgat 388
Query: 185 tgattatgcagagattcacaacaggtcaaagtgttaagaataagtgtctattggcactca 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgattatgcagagattcacaataggtcaaagtgttaagaataagtgtctattggcactca 448
Query: 245 gctctaaataaaacatcttcataaatccactactaccatatatcatgaatatcctggata 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 449 gctctaaataaaacatcttcataaatccactaccaccatatatcatgaatatcctggata 508
Query: 305 aagaggtagaacaaatgtaagatccagaggatagggaggagtgatgtgcaatgctgtttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagaggtagaacaaatgtaagatccagaggatagggaggagtgatgtgcaatgctgtttt 568
Query: 365 ctggtcatccattgctttcctacacaagatcaacctaaccaaaatatcagcaaagacaga 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctggtcatctattgctttcctacacaagatcaacctaaccaaaatatcagcaaagacaga 628
Query: 425 ctctaagtatttcactagaaacctcttagggcatataagtgattctagtaaaggagcatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 629 ctctaagtatttcactagaaacctcttagggcatataagtgattctagtaaaggaacatg 688
Query: 485 atacaacaccaacacataacattactaacttttctatatacaaataataggtatcctgag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 atacaacaccaacacataacattactaacttttctatatacaaataataggtatcctgag 748
Query: 545 aaataaatcaggaaaatatatttattcctaattgctttcaaattcctaggaaaaagatta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaataaatcaggaaaatatatttattcctaattgctttcaaattcctaggaaaaagatta 808
Query: 605 atcaagtatcttaaatacttatataaataatgtttttaaacactgaaca 653
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atcaagtagcttaaatacttatataaataatgtttttaaacactgaaca 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_o16.g1 MSMg01no054_o16.g1 CHROMAT_FILE:
MSMg01no054_o16.g1 PHD_FILE: MSMg01no054_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:13 2005
(503 letters)
>mm_chrX_111388029_111388930
Length = 902
Score = 600 bits (310), Expect = e-175
Identities = 331/338 (97%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 166 atgttgttgttctttctgtggggttgcaaacaccttcagttcattcagtcctttctctaa 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 atgttgttgttctttctgtggggttgcaaacaccttcagttcattcagtcctttctctaa 843
Query: 226 ctcctctattggggaccctgtgctcagacctctgtatttgtaaggctcttgaagagcttc 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctcctctattggggaccctgtgctcagacctctgtatttgtaaggctcttgaagagcttc 783
Query: 286 tcaggaaacagctatatcaggctcctttcagcaagtacttgttggcatccacagcaccgc 345
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 782 tcaggaaacagctatatcaggctcttttcagcaagtacttgttggcatccacagtagtgt 723
Query: 346 ctgggtttggtgactatatagatttatgaattttataataaatgggaaacttttagtaag 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctgggtttggtgactatatagatttatgaattttataataaatgggaaacttttagtaag 663
Query: 406 cattcaaatattgtttctgattttgctttttcttctcttctagaataagttaagtgattt 465
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 662 cattcaaatattttttctgattttgc-ttttcttctcttctagaataagttaagtgattt 604
Query: 466 attgatctttttatttatgtaagagatctgtttaaaaa 503
||||||||||||||||||||||||||||||||||||||
Sbjct: 603 attgatctttttatttatgtaagagatctgtttaaaaa 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 902
Length adjustment: 10
Effective length of query: 493
Effective length of database: 892
Effective search space: 439756
Effective search space used: 439756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
