TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAAATCACCGAACTCATTTTATTAACAGAGGAAATATCAGAACCAC
ATAGCATTTAGGCATTTAGGCTCAGACATAGTTTCTGCTCACTGCTCTTA
CCCTAATCTATTGTGAAATAAAGAACAATAATTAGAACAGAAAGATAAGA
AAAAACTGTGAAATTTTGCAAGGAACGGAGCATAAACAATTTTATATTTG
TAGAAAGCAAGGCACAAAAATATAAAACAAAACAAAAAGTCATGATTATA
TATATATATATATATATATATATATATATATGGTTTTTTTGAGGCAGGAT
TACTTTGTTTATATCTGGCCGCCCCGGTAGTCATTTTTGAATAAATAGCC
CTGGCCTCCAAATTCGCACCCCCATTGTACATCGTCTCTTGACGGTCGTT
TATTATGTATATAGTCTTTAAAGATATTCCTTTCTATCCCGGTTTTACAA
CGTTGTTTCTCTGTCCTATATCTTCTTACCCCCGTGTATCGTAGAATGTT
TCTTCTGTATATTTTTTGCCCGGCCGATTCCTTGTAAGGTTTATTAATTC
ACCTCCGCCCCTCCTTCCTCTTTCTTCACTCCTTTTCTTTTTCCCCACTT
TCACCCGTTACCTACTGTGCTATTTTTTCTTTCTATCTTTACCCCCTACT
ATTTCTCTACTTAATATTCTTTATACCATTTTTCTTCACCCCCCCCCCC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTATCAAGGTAGTGCTTCAAAGCC
AGTCTCCTATAAGCTTTCTCACATCTTCTTGGATAACTTTGGGTTTGACA
CCTCCCATACACTCTAGTAAGTAGTTTCTTTCTTTCCTTTTTTATTGTCA
GTGAGTAGGCTGGCACCAGAGAGAAGTAGAAAGCAAAACATAGGAGGATG
CATCCTGAGCAGCTATTCAATGTTCCTCAGCCTCTCGCTGAGAAGTCTGG
AAATCTCAGCCATAAATGATTTTAAGAGTGATAAGGGTATTACAGATTAA
TAAGTAAAATATTTTTAGATGTAGGAGATAAATGTGGAAATACTGATGTA
GAAAGTGTCATGATGGCGGGAACTCATGTTTTAAAAGTTTATAAAAAATA
AACACACAAAAGAAAGCAGGTAAAATAAAATATTGAATATTAATTTAAGA
GTTCCATTAACAATTTTTCATTATATCACTATGTAGTTTTCATAACATTT
GGAAAATATAATAGTAAATAATTAATCAAGAAAGTTCATAACCTTACCAT
CAGTCCCAGACCATTTTCACTTCCTCACTGGTAGCATATTTGATAGTGTA
GTGAACTGTTTAGAACTCCTAGTCTAGGAGCCAGTTGTCTCATCAGTTGT
CCTATGCAACTGGGCAGATGTTTGCTGATTCATCCA

Query= MSMg01no055_j19.g1 MSMg01no055_j19.g1 CHROMAT_FILE:
MSMg01no055_j19.g1 PHD_FILE: MSMg01no055_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:03 2005
         (653 letters)



>mm_chrX_65755814_65756866
          Length = 1053

 Score = 1118 bits (578), Expect = 0.0
 Identities = 590/594 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatcaaggtagtgcttcaaagccagtctcctataagctttctcacatcttcttggataa 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ttatcaaggtagtgcttcaaggccagtctcctataagctttctcacatcttcttggataa 535

                                                                       
Query: 61  ctttgggtttgacacctcccatacactctagtaagtagtttctttctttccttttttatt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 534 ctttgggtttgacacctcccatacactctagtaagtagtttctttctttctttttttatt 475

                                                                       
Query: 121 gtcagtgagtaggctggcaccagagagaagtagaaagcaaaacataggaggatgcatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtcagtgagtaggctggcaccagagagaagtagaaagcaaaacataggaggatgcatcct 415

                                                                       
Query: 181 gagcagctattcaatgttcctcagcctctcgctgagaagtctggaaatctcagccataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gagcagctattcaatgttcctcagcctctcgctgagaagtctggaaatctcagccataaa 355

                                                                       
Query: 241 tgattttaagagtgataagggtattacagattaataagtaaaatatttttagatgtagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgattttaagagtgataagggtattacagattaataagtaaaatatttttagatgtagga 295

                                                                       
Query: 301 gataaatgtggaaatactgatgtagaaagtgtcatgatggcgggaactcatgttttaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gataaatgtggaaatactgatgtagaaagtgtcatgatggcgggaactcatgttttaaaa 235

                                                                       
Query: 361 gtttataaaaaataaacacacaaaagaaagcaggtaaaataaaatattgaatattaattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gtttataaaaaataaacacacaaaagaaagcaggtaaaataaaatattgaatattaattt 175

                                                                       
Query: 421 aagagttccattaacaatttttcattatatcactatgtagttttcataacatttggaaaa 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 174 aagagttccattaacaatttttcattatatcactatgcagttttcataacatttggaaaa 115

                                                                       
Query: 481 tataatagtaaataattaatcaagaaagttcataaccttaccatcagtcccagaccattt 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 114 tataatagtaaataattaatcaagaaagttcataaccttactatcagtcccagaccattt 55

                                                                 
Query: 541 tcacttcctcactggtagcatatttgatagtgtagtgaactgtttagaactcct 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  tcacttcctcactggtagcatatttgatagtgtagtgaactgtttagaactcct 1



 Score = 62.6 bits (32), Expect = 1e-13
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                           
Query: 212 ctgagaagtctggaaatctcagccataaatga 243
           ||||||||||||||||||||||||||||||||
Sbjct: 999 ctgagaagtctggaaatctcagccataaatga 968


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)