Query= MSMg01no062_h01.b1 MSMg01no062_h01.b1 CHROMAT_FILE:
MSMg01no062_h01.b1 PHD_FILE: MSMg01no062_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:02 2005
(782 letters)
>mm_chrX_164275367_164276546
Length = 1180
Score = 1473 bits (762), Expect = 0.0
Identities = 777/782 (99%), Gaps = 2/782 (0%)
Strand = Plus / Minus
Query: 1 atctctcctttcttctccttctctgaccttgctccccaatcctgtagcaaaagttatttt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 980 atctctcctttcttctccttctctgaccatgctccccaatcctgtagcaaaagttatttt 921
Query: 61 gttttgatgcactcatgattctagccccctgtttgtattcatttgtgttctaaaagtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gttttgatgcactcatgattctagccccctgtttgtattcatttgtgttctaaaagtact 861
Query: 121 actctgtggtaaatacacactctagggctccacatttaaaagaccaaggtaggaagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 actctgtggtaaatacacactctagggctccacatttaaaagaccaaggtaggaagagta 801
Query: 181 gtgtcccacacatctaggaacatttgtttgggacacaagttgaataattcttagtgcttc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 800 gtgtcccacacatctaggaacatttgtttgggacacaagttgagtaattcttagtgcttc 741
Query: 241 catagcattgttgtttaatgcttctaggactcgaggcaatgtgaatccagcctgccatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 catagcattgttgtttaatgcttctaggactcgaggcaatgtgaatccagcctgccatat 681
Query: 301 ccaaagcatgaaatcccctcttatctggtggtgttgacaaatttaactaacagacatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccaaagcatgaaatcccctcttatctggtggtgttgacaaatttaactaacagacatctg 621
Query: 361 ttgtcgtaggtgttaggcactgaccaataacaattatagcttccaactgcttgtgtgata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 ttgtcgtaggtgttaggcactgaccaataacaattatagcttccaactgcttgtgtgaca 561
Query: 421 catagtgtaaaattagttaagctttattgacaagcataccagcagatttatcatactcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catagtgtaaaattagttaagctttattgacaagcataccagcagatttatcatactcca 501
Query: 481 gagatcaaaaactaaaaactgagagattgtagatggtaagggaacatagctgccaacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagatcaaaaactaaaaactgagagattgtagatggtaagggaacatagctgccaacaaa 441
Query: 541 atcctttcacagtgctggcttgatatggagaactacaaactgccttttaggaaataaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcctttcacagtgctggcttgatatggagaactacaaactgccttttaggaaataaatg 381
Query: 601 actttaagtccactctatacatatctgttgctcttgctttacttcttttgctataaggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actttaagtccactctatacatatctgttgctcttgctttacttcttttgctataaggat 321
Query: 661 tatggaatgaattatcacaacaaaccaaattttcacagagtaaatagatttttttcagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatggaatgaattatcacaacaaaccaaattttcacagagtaaatagatttttttcagtt 261
Query: 721 atagatccaataaaaagatttcataatattgtcatgatgatatgtgtatttattaatgga 780
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 260 atagatccaat-aaaagatttcataatattgtcatgatgatatgtgta-ttattaatgga 203
Query: 781 ga 782
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 782
Length of database: 1180
Length adjustment: 10
Effective length of query: 772
Effective length of database: 1170
Effective search space: 903240
Effective search space used: 903240
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_h01.g1 MSMg01no062_h01.g1 CHROMAT_FILE:
MSMg01no062_h01.g1 PHD_FILE: MSMg01no062_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:02 2005
(663 letters)
>mm_chrX_164154813_164155877
Length = 1065
Score = 1224 bits (633), Expect = 0.0
Identities = 657/665 (98%), Gaps = 2/665 (0%)
Strand = Plus / Plus
Query: 1 ttttgaaaatacaatggggctgtttctctgtagaccattagtaagaggaagttgctatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgaaaatacaatggggctgtttctctgtagaccattagtaagaggaagttgctatgt 260
Query: 61 aattttcatctccctaataattatttgcacttgacttcggcatgccattgtgactaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattttcatctccctaataattatttgcacttgacttcggcatgccattgtgactaggct 320
Query: 121 ggtctactgctatcattttctgtccctccagcaatctcctacaaaggtgctggttggagg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtctactgctatcattttccgtccctccagcaatctcctacaaaggtgctggttggagg 380
Query: 181 tgggttgcagctgtgaaccccgtgatcaatagatctcccccatctgagcatccactgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggttgcagctgtgaaccccgtgatcaatagatctcccccatctgagcatccactgaaa 440
Query: 241 gcaagaggggagaagtgcaattgcatattagatttttcagttctgtggtgaattgtgata 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gcaagaggggagaagtgcaattgcatattagaagtttcagttctgtggtgaattgtgata 500
Query: 301 atgttcctagaatactcttaggagactggtcatagatgccaggactatgcaagaaccaac 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 atgttcctagaatactcttaggagactggtcatagatgtcaggactatgcaagaaccaac 560
Query: 361 ataaaacaaatggcccattttt-actttctgcatacataaaaaagtaactt-ctaatcac 418
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 561 ataaaacaaatggcccattttttactttctgcatacataaaaaagtaactttctaatcac 620
Query: 419 cgctctagttcatttcaaatacaaagcacatggcacacccccatccccacacatacttca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgctctagttcatttcaaatacaaagcacatggcacacccccatccccacacatacttca 680
Query: 479 aaaaagagttttgaggacttatcagctggtgaaataaaaatatgagaatgggctcaaatg 538
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaagagttttgaggatttatcagctggtgaaataaaaatatgagaatgggctcaaatg 740
Query: 539 cagcatgttctgtaggaggcagcaaactactatagctcatatgtcaaacatggtccccag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagcatgttctgtaggaggcagcaaactactatagctcatatgtcaaacatggtccccag 800
Query: 599 tttgtttttaatcaataaagttttatgagggcaaagctgtacctgtttgactatttcctg 658
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 801 tttgtttttaatcaataaagttttatgagggcaaagctgtatctgtttgactatttcctg 860
Query: 659 ggatc 663
|||||
Sbjct: 861 ggatc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1065
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1055
Effective search space: 688915
Effective search space used: 688915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
