Query= MSMg01no064_f23.b1 MSMg01no064_f23.b1 CHROMAT_FILE:
MSMg01no064_f23.b1 PHD_FILE: MSMg01no064_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:14 2005
(458 letters)
>mm_chrX_158321117_158321975
Length = 859
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%), Gaps = 1/340 (0%)
Strand = Plus / Minus
Query: 13 gaattc-aactttaatttcagcggtcttcttcccccatttctcatttaattttgaagaac 71
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaattcaaactttaatttcagcggtcttcttcccccatttctcatttaattttgaagaac 281
Query: 72 ctggcagaggaagagggaaaagccgcgattagcctgtggtagagtataaaatctttctag 131
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 280 ctggcagaggaagagggaaaagctgggattagcctgtggtagagtataaaatctttctag 221
Query: 132 gacaggagtgttgtgataaatatttaatattaatcgagtttctactccaccatggatcat 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gacaggagtgttgtgataaatatttaatattaatcgagtttctactccaccatggatcat 161
Query: 192 tttgttctcagataaaagaccgaaaacttttatatttgtaataaaccttaatcagcacta 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tttgttctcagataaaagaccgaaaacttttatatttgtaataaaccttaatcagcacta 101
Query: 252 gagatgggcagatgtctaccctctaagctattagtatctacttttctatcaataacccta 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gagatgggcagatgtctaccctctaagctattagtatctacttttctatcaataacccta 41
Query: 312 aaatatgatttgccatgttctacctgggccactcttgccc 351
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aaatatgatttgccatgttctacctgggccactcttgccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_f23.g1 MSMg01no064_f23.g1 CHROMAT_FILE:
MSMg01no064_f23.g1 PHD_FILE: MSMg01no064_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:14 2005
(121 letters)
>mm_chrX_158249609_158250129
Length = 521
Score = 219 bits (113), Expect = 6e-62
Identities = 119/121 (98%)
Strand = Plus / Plus
Query: 1 caacacagaacagctgatgagtttaaaacaatggattctgagcccaggggttgtgacata 60
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 201 caacacagaacagctgatgagtttaagacaatggattctgagcccagtggttgtgacata 260
Query: 61 tggctgattttaaatattaagattgtctgctgttctacatgtgtaaagattcaggtgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctgattttaaatattaagattgtctgctgttctacatgtgtaaagattcaggtgggc 320
Query: 121 a 121
|
Sbjct: 321 a 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 521
Length adjustment: 8
Effective length of query: 113
Effective length of database: 513
Effective search space: 57969
Effective search space used: 57969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
