Query= MSMg01no066_d06.b1 MSMg01no066_d06.b1 CHROMAT_FILE:
MSMg01no066_d06.b1 PHD_FILE: MSMg01no066_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:55 2005
(323 letters)
>mm_chrX_34574016_34574734
Length = 719
Score = 574 bits (297), Expect = e-168
Identities = 315/323 (97%), Gaps = 4/323 (1%)
Strand = Plus / Minus
Query: 1 tccgactgcctggtctacagagcaagttccaggacagtcagggctacacagtgaaaccct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tccgactgcctagtctacagagcaagttccaggacagtcagggctacacagtgaaaccct 413
Query: 61 atcttggattaaaaaatcagcaggcttaatggcagctccctttatctgctgaaccattat 120
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 412 atcttggattaaaaaatcagcaggcttaatggcagctccc----tctgctgagccattat 357
Query: 121 ccctggcccctggcttcaaactcttggtcctcctgcttccccctgaacaactggatcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccctggcccctggcttcaaactcttggtcctcctgcttccccctgaacaactggatcata 297
Query: 181 gcggtgtggcaccatagtgagctgacttcttatcagagccagtttgttcattacttttgc 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gcagtgtggcaccatagtgagctgacttcttatcagagccagtttgttcattacttttgc 237
Query: 241 tttgtaatggggccactgaagagctaagacaggcataggagccaccgcttttctgtcatt 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 236 tttgtaatggggccactgaagagctaagacaggcataggagccactgcttttctgtcatt 177
Query: 301 ttcctcttgaccactttcactgt 323
|||||||||||||||||||||||
Sbjct: 176 ttcctcttgaccactttcactgt 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 719
Length adjustment: 9
Effective length of query: 314
Effective length of database: 710
Effective search space: 222940
Effective search space used: 222940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_d06.g1 MSMg01no066_d06.g1 CHROMAT_FILE:
MSMg01no066_d06.g1 PHD_FILE: MSMg01no066_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:55 2005
(194 letters)
>mm_chrX_34422770_34423363
Length = 594
Score = 346 bits (179), Expect = e-100
Identities = 188/191 (98%)
Strand = Plus / Plus
Query: 4 ggaattcactcatatttccctcttttctctgtagtctctattggatgaacctaatcccaa 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactcatatttgtatcttttctctgtagtctctattggatgaacctaatcccaa 263
Query: 64 tagtccagcaaacagccaggctgcccagctgtaccaggagaacaagcgggaatatgaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagtccagcaaacagccaggctgcccagctgtaccaggagaacaagcgggaatatgaaaa 323
Query: 124 gcgtgtttctgcaatagtagaacaaagctggcgcgactgttgactcagggtagagcagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcgtgtttctgcaatagtagaacaaagctggcgcgactgttgactcagggtagagcagaa 383
Query: 184 gaagaggctgg 194
|||||||||||
Sbjct: 384 gaagaggctgg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
