Query= MSMg01no067_c24.b1 MSMg01no067_c24.b1 CHROMAT_FILE:
MSMg01no067_c24.b1 PHD_FILE: MSMg01no067_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:13 2005
(294 letters)
>mm_chrX_161721404_161722097
Length = 694
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Minus
Query: 1 tcactataggaaacaagagggtaaggggccccataaactggagaggcctcattgccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcactataggaaacaagagggtaaggggccccataaactggagaggcctcattgccttct 434
Query: 61 ttgggaaatcttaaagcatgtcacatatacccaatacaaacatgaacatggtgttgttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgggaaatcttaaagcatgtcacatatacccaatacaaacatgaacatggtgttgttgc 374
Query: 121 atttttaactgtaacttctttaattttcacaaattaggctttcttgctcacttgtcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atttttaactgtaacttctttaattttcacaaattaggctttcttgctcacttgtcacac 314
Query: 181 aaattttgaatggttcagtaacagctattcccaaatagacactgaactgctaatagtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaattttgaatggttcagtaacagctattcccaaatagacactgaactgctaatagtctc 254
Query: 241 tttcctatcatagttctcttgtctctttgggtaactcccaaaatgaacaatga 293
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 253 tttcctatcatagttctctggtctctttgggtaactcccaaaatgaacaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_c24.g1 MSMg01no067_c24.g1 CHROMAT_FILE:
MSMg01no067_c24.g1 PHD_FILE: MSMg01no067_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:13 2005
(279 letters)
>mm_chrX_161509421_161510099
Length = 679
Score = 495 bits (256), Expect = e-144
Identities = 271/276 (98%), Gaps = 2/276 (0%)
Strand = Plus / Plus
Query: 5 agattc-tgtctctattagaagcagataaaagggaaagataatattgaagaaagcaaatg 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agattcatgtctctattagaagcagataaaagggaaagataatattgaagaaagcaaatg 264
Query: 64 atatatcaggaatttgaagggacgttactctcttatgttagaaaaatatactgccaattt 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatatcaggaatttgaaggggcgttactctcttatgttagaaaaatatactgccaattt 324
Query: 124 tcaaattctccttacatactgatagctaactgccaattgagggacagatttatatggagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaaattctccttacatactgatagctaactgccaattgagggacagatttatatggagg 384
Query: 184 ccttaatatttttgactcctgtgcaaaagaagtttgcatgtgaccattggagtttcattt 243
|||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 ccttaata-tgttgactcctgtgcaaaagaagtttgtatgtgaccattggagtttcattt 443
Query: 244 aagaggggcccttgactcttcatgaattgaatttgt 279
||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagaggggcccttgactcttcatgaattgaatttgt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
