Query= MSMg01no069_a07.b1 MSMg01no069_a07.b1 CHROMAT_FILE:
MSMg01no069_a07.b1 PHD_FILE: MSMg01no069_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:38 2005
(286 letters)
>mm_chrX_64909481_64910166
Length = 686
Score = 499 bits (258), Expect = e-146
Identities = 279/286 (97%), Gaps = 2/286 (0%)
Strand = Plus / Plus
Query: 1 taattgcaatgtccctatgcttgggtttattctcagcattcaaccctttgca-aaatctg 59
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 taattgcaatgtccctatgcttgggtttattctcagcattcaaccctttg-ataaatctg 259
Query: 60 tctacacaaaacggcagctggtccactggcaattgaactgcttctggtgacataatttca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctacacaaaacggcagctggtccactggcaattgaactgcttctggtgacataatttca 319
Query: 120 gggtgtttttagtttctgaaagagagcagctgtccagagctccataaacatcatgcatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggtgtttttagtttctgaaagagagcagctgtccagagctccataaacatcatgcatga 379
Query: 180 gaaagtttgctcacattttctctaggggcaaataggctatatggggtgaaaatccgagag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 gaaagtttgctcacattttctctaggggcaaataggctatatggggtgaaaatctgagag 439
Query: 240 cattttcttttatacaacaatcttgtgtgcatatagcggtgggggc 285
||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 440 cattttcaggtaaacaacaatcttgtgtgcatatagcggtgggggc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_a07.g1 MSMg01no069_a07.g1 CHROMAT_FILE:
MSMg01no069_a07.g1 PHD_FILE: MSMg01no069_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:39 2005
(244 letters)
>mm_chrX_65048135_65048778
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 cattattctgattgaaaatcaatataaaaatattgcaatctactaaatgccctaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 cattattctgattgaaaatcaatataaaaatattgcaatctactaaatgacctaataaat 385
Query: 61 atattcagggtagtttatatagtagctacagagcatatcttctgttttagttcatataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atattcagggtagtttatatagtagctacagagcatatcttctgttttagttcatataga 325
Query: 121 atttctgatatttatatctttatttgggacataaaataagttataaaaaatttagctttg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 324 atttctgatatttatatctttatttgggacataaaataagtcataaaaaatttagctttg 265
Query: 181 acatcaatatcctgtcaaaagtctcattaattccatggtataatgctccaaattttcaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 acatcaatatcctgtcaaaagtctcattaattccatggtataatgctccaaaatttcaaa 205
Query: 241 agaa 244
||||
Sbjct: 204 agaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
