XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATCT
ACCGGATTTTATCACCAAATCCTGAGATTAAACCCCTTTCTAAGCAGACA
TCAACATTTTTTTTAAATTTTCTGTCTCACAATACTTCTTTAGAAGATGT
CCTCATCACGGTTCCCAAGTAATGCCTTCAGACACTTCTAACTTTCTGTA
ACAACCTTACCACATAGAGCCTATGTAAGGCATCCTGTTGGGTAGCATTC
TGTCTTAAGCTGTGCACATCCAAAGTGTTTGTATTCTTCACAGTGGCCTA
TGAGGCTAGTGTGATAAATCTGGCATGAGCTATCAGGTGAAGAAGTATTA
CCACTGCAGCCACAAAGCTTGCAGTTTCCACTGCTCATATCATGATGCTG
CAGAAGGTTTCTTTGATTTTCATAGACACTGGCTTCTTATTCCCAAATCT
TTGTAGTGGTACTGTATTCTGCCTGTCTGTGTAAACAATTAAACATGAAC
CATGTCTTAGTATACTGGTTGCATCTTGAGAAGTTTGTTGTTCTTTTCTA
CTGGATAGCCTGTTACTGGGGAAATCAGGCCATCAAGATTATTCTTAGCC
TGGAAGGTACAGAGTCAGGGTCAGAGGAAGTGTGAAGTCTGCGTATGGAC
TAGTTCTTAATCAAGATAT

NNNAACGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTATACAGA
GAAACTCTGTATCGAAAAAAAGAAAATCCAAAAACAAGTGAACAAAAAAC
TTAACCCAAACCAAAAAAAAACAAAAAAAACAAAAAAAACCAAAAAAAAA
CCCAAAAACAAACAAACAAACAAAAAAACCACCCCCCCAAAATACTAAAA
AACAAAAATCATAAAAAAAACTTTAAAGCCTAAAAAAAACCCAAACCCTG
AAGAACCCTAATATCCTAAAAAAAAAAAGAAAAAAAAAAGAAAAAACAGA
AAAAAACACTACAAATACACTAAAATACTGAAAACCAAAAACACCTCTAA
AACACTCTTCTTAATACCCTAGAAAACTCTTAAGAAGAACACTAAAATTC
TAAAAAATTAAGAATATAAAAGAATGTAAAAATGACCCCAAAAGTGGGCT
TATTCTTGTTTTTTTGTTTTTTTTTGAGTTTTTGGAGACTGGATTTCCTG
TATCTGTGGCTGTTCTGGAGCTCTGTCTGTAGACCAGGCTGGCCATTAAC
TCAAAAATCCTCCTACCTCTGCCTCCTAATTGCTGGAATTAAAGGCATGG
TCCACCATTGCCTGGAAACCCAAAAACAA

Query= MSMg01no070_n15.g1 MSMg01no070_n15.g1 CHROMAT_FILE:
MSMg01no070_n15.g1 PHD_FILE: MSMg01no070_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:03 2005
         (598 letters)



>mm_chrX_121324670_121325668
          Length = 999

 Score =  673 bits (348), Expect = 0.0
 Identities = 515/592 (86%), Gaps = 51/592 (8%)
 Strand = Plus / Minus

                                                                       
Query: 24  gaaactctgtatcg------aaaaaaagaaaatccaaaaacaagtgaac-aaaaaactta 76
           |||||||||| |||      ||||||| ||||||||||||||||  ||| ||||||| ||
Sbjct: 890 gaaactctgtctcgaaaaaaaaaaaaaaaaaatccaaaaacaagcaaacaaaaaaaccta 831

                                                                       
Query: 77  acccaaaccaaaaaaaaacaaaaaaaacaaaaaaaaccaaaaaaaaacccaaaaacaaac 136
           ||||||||    |||||||     |||||||      |||| |||||   ||||||    
Sbjct: 830 acccaaac----aaaaaac-----aaacaaa------caaacaaaaa---aaaaac---- 793

                                                                       
Query: 137 aaacaaacaaaaaaacc-accccccc---aaaatact--aaaaaacaaaaatcataaaaa 190
              ||||| |||||||| ||||||||   ||||||||  |||||| ||||||||| | | 
Sbjct: 792 ---caaaccaaaaaaccaacccccccaaaaaaatactaaaaaaaaaaaaaatcat-agac 737

                                                                       
Query: 191 aaactttaaagcctaaaaaaaacccaaaccctgaagaaccctaatatcctaaaaaaaaaa 250
           |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 736 aaactttaaagcct-aaaaaaacccaaaccctgaaaaaccctaatatcctaaaaaaaaa- 679

                                                                       
Query: 251 agaaaaaaaaaagaaaaaacagaaaaaaacactacaaatacactaaaatactgaaaacca 310
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 --aaaaaaaaaa-aaaaaacagaaaaaaacactacaaatacactaaaatactgaaaacca 622

                                                                       
Query: 311 aaaacacctctaaaacactcttcttaataccctagaaaactcttaagaagaacactaaaa 370
           ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 621 aaaacacctctaaaacactcttcttaaaatcctacaaaactcttaagaagaacactaaaa 562

                                                                       
Query: 371 ttctaaaaaattaagaatataaaagaatgtaaaaatgaccccaaaagtgggcttattctt 430
           |||||||||||||| |||||| ||||| |||||| |||||| |||| |||||||||| ||
Sbjct: 561 ttctaaaaaattaaaaatatacaagaacgtaaaagtgacccaaaaactgggcttattttt 502

                                                                       
Query: 431 gtttttttgtt-t-ttttttgagtttttggagactggatttcctgtatc--tgtggctgt 486
           |||||||| || | |||||||||||||||||| ||||||||||||||||  |||  ||||
Sbjct: 501 gttttttt-ttgtgttttttgagtttttggagcctggatttcctgtatccctgt--ctgt 445

                                                                       
Query: 487 tctggagctctgtctgtagaccaggctggccattaactcaaaaatcctcctacctctgcc 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctggagctctgtctgtagaccaggctggccattaactcaaaaatcctcctacctctgcc 385

                                                               
Query: 547 tcctaattgctggaattaaaggcatggtccaccattgcctggaaacccaaaa 598
           ||||||||||||| ||||||||||||| |||||| ||||||| |||||||||
Sbjct: 384 tcctaattgctgggattaaaggcatgggccaccactgcctggtaacccaaaa 333


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 131
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space:   581532
Effective search space used:   581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)