Query= MSMg01no074_f05.b1 MSMg01no074_f05.b1 CHROMAT_FILE:
MSMg01no074_f05.b1 PHD_FILE: MSMg01no074_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:39 2005
(277 letters)
>mm_chrX_156035852_156036528
Length = 677
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%)
Strand = Plus / Plus
Query: 1 gcttccagcaaaacatgactgaaaattctgaacccatggagatagaactaacaccaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 gcttccagcaaaacatgactgaaaattctgaacccatggagatagaactaagaccaggag 260
Query: 61 acatggagggaaatggatagaatactaaaacttcttccatggtcagctgtcatgtcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatggagggaaatggatagaatactaaaacttcttccatggtcagctgtcatgtcaagt 320
Query: 121 cataatatcctaagatggggatccagaaggcctaagcccagtggtggaatgctttggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cataatatcctaagatggggatccagaaggcctaagcccagtggtggaatgctttggtac 380
Query: 181 catcagtgaaatcctgtggtagtttaaataagaacagctcctgtaggctcataatatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcagtgaaatcctgtggtagtttaaataagaacagctcctgtaggctcataatatttg 440
Query: 241 aatggttagttaccacggtacggtactatttgagaag 277
|||||||||||||||||||| ||||||||||||||||
Sbjct: 441 aatggttagttaccacggtatggtactatttgagaag 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_f05.g1 MSMg01no074_f05.g1 CHROMAT_FILE:
MSMg01no074_f05.g1 PHD_FILE: MSMg01no074_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:39 2005
(273 letters)
>mm_chrX_156203988_156204661
Length = 674
Score = 491 bits (254), Expect = e-143
Identities = 269/274 (98%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 1 tcacagggtccaaggtgggattacaaagtagattcatatacctggggaaagatcccacac 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 474 tcacagggtccaaggtgggattacagagtagattcatatacctggggaaagatcccacgc 415
Query: 61 attagcaaatcaaaacagactatcaaacccgaagaaagagttcctcttttgatcatagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 attagcaaatcaaaacagactatcaaacccgaagaaagagttcctcttttgatcatagct 355
Query: 121 atgaagagatactgacagactgcaacatcctaaaggttttaagaacaaagcttgctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atgaagagatactgacagactgcaacatcctaaaggttttaagaacaaagcttgctggaa 295
Query: 181 acaaaaggggaggggtggacttcaataacttaagtccaaaagcttgaaaaatttacacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acaaaaggggaggggtggacttcaataacttaagtccaaaagcttgaaaaatttacacag 235
Query: 241 aaatttacgag-aactagagtgatccctcacaga 273
|| |||| ||| ||||||||||||||||||||||
Sbjct: 234 aagtttaggaggaactagagtgatccctcacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
