Query= MSMg01no076_g06.b1 MSMg01no076_g06.b1 CHROMAT_FILE:
MSMg01no076_g06.b1 PHD_FILE: MSMg01no076_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:21 2005
(490 letters)
>mm_chrX_48559977_48560866
Length = 890
Score = 909 bits (470), Expect = 0.0
Identities = 485/490 (98%)
Strand = Plus / Plus
Query: 1 ttttacgcaagaaatcaatctctgtgtgttaaatgcgaaataatcagagtacgacagcaa 60
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ttttaggcaagaaatcaatctctgtgtgttaaatgcaaaataatcagagtacgacagcaa 260
Query: 61 tggttagaagactgggcacaaactgcccctcacatcattaaaatctgcaatggcatttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttagaagactgggcacaaactgcccctcacatcattaaaatctgcaatggcatttgg 320
Query: 121 caagaactgggaaagtcaccaggacaatgtacagggatcatgtcaaacacttgagagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagaactgggaaagtcaccaggacaatgtacagggatcatgtcaaacacttgagagtta 380
Query: 181 tggccaggatcctaacaagtcaaaataaggacttcctggttacctcatgaactcctaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggccaggatcctaacaagtcaaaataaggacttcctggttacctcatgaactcctaact 440
Query: 241 acttctcccacgccttctttcatacttgccaaagtccctgcactactgtaaaaaaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttctcccacgccttctttcatacttgccaaagtccctgcactactgtaaaaaaaaaaa 500
Query: 301 agtcaaacttgtctggcatataggaagtggttttgcaagtccacgagccactaccaaact 360
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 501 agtcaaacttgtctggcatataggaagtggttttgccagtccacgagccaccaccaaact 560
Query: 361 aaagaggtgttggttacttcgagagactggaagacaggcaaggctgtataactttatgcc 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 aaagaggtgttggttacttcgagagactggaagacaggcaaggcagtataactttatgcc 620
Query: 421 cagtgacccaacaaatgaggagctgtcatgtcagtgactcaacaaaaggagtctttatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagtgacccaacaaatgaggagctgtcatgtcagtgactcaacaaaaggagtctttatac 680
Query: 481 taaacttggg 490
||||||||||
Sbjct: 681 taaacttggg 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_g06.g1 MSMg01no076_g06.g1 CHROMAT_FILE:
MSMg01no076_g06.g1 PHD_FILE: MSMg01no076_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:21 2005
(442 letters)
>mm_chrX_48684740_48685577
Length = 838
Score = 737 bits (381), Expect = 0.0
Identities = 426/443 (96%), Gaps = 6/443 (1%)
Strand = Plus / Minus
Query: 1 ttag-aatcagtaattatgcttctttatttgttcttaattgtaaattgagcttgtgttgg 59
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttagaaatcagtaattatg---ctttatttgttcttaattgtaaattgagcttgtgttgg 582
Query: 60 atgatctgcatagacatttacctcagtaagttattgtgaattcaaatctttgaattggaa 119
|||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 581 atgatcggcataggcatttacctcagtaagttattgtgagttcaaatctttgaattggaa 522
Query: 120 aatctgttgggtgagtggagtactcaggacagacctggtctcctctcacttttctacctt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 521 aatctgttgggtgagtggagtactcaggacagacctggtctcctctcacttttctatctt 462
Query: 180 tttttctttgtcaaataaaaccaaggttttacatgctagttggttgtagtggattttatt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 461 tttttctttgtcaaataaaaccaaggttttacatgctagttggttgtagtggattttagt 402
Query: 240 agcttcctttgctcaggtgtctctagttgtctgcggctgacctcataaagggtctgttat 299
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 401 agcttcctttgctcgggtgtctccagttgtctgcggctgacctcataaagggtctgttat 342
Query: 300 catgtaagactaccagacaacaaggaatatcatgagtatcatgtgtctataggcacacac 359
||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 341 catataagactaccagacaacaaggaatatcatgagtatc--gtgtctataggcgcaaac 284
Query: 360 ctcttggcaatactcacaaatggctcccaagaagccacattcaggttctaaacttcatga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcttggcaatactcacaaatggctcccaagaagccacattcaggttctaaacttcatga 224
Query: 420 gacatgatgcagcatgttcttct 442
|||| ||||||||||||||||||
Sbjct: 223 gacaggatgcagcatgttcttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 838
Length adjustment: 9
Effective length of query: 433
Effective length of database: 829
Effective search space: 358957
Effective search space used: 358957
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|