NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTTGCTTCTCAAGTTAGGAAAATTTACAGTTCTATATTATAAATA
CACACAAATTATCATTCAGTTCTTGTCATGCTCTTTCCTGATAAAGGTCT
TCATTACAGGTTCCATTTTCCCCACATTTGTACCATTAGTTCATTGAGGC
TCTCTTTCCACCTACTGTGAAGCCTGCTGGCCTGTGATGCTTCTTCAGGT
GCTGTCTTTCTTCTGTCCTGTGATTCTAAGCTGCTGTCTGCAATCCTTCA
TGCCACCTAGTCTTTGGCAGCTTCTTTTTTACATCTGCTTGCTCCACTTA
CTGTTGGCATCTGCCGCCTTGCTTTGCTATAGCTTCCAAGGGAGAACTCA
ATATGGGGCACCTGCCAACCTGAAGCACAGAAACATTTAAATTGCCAAGC
ATTGCCTCCAGAGGTGGAATGTTCTTGTGCGTCTGTACAGTGCTCTCCAG
AACTCCTTCCACCTCCACTTCTCTGGGCATCACTGGATTGTCATGTTCGT
GGATACTTTGCAAAACTGTGTGGGTGGCCTCTGTGTTTCTCTTCCTCCTC
TACCTTTTATCCATTAGGATATCTATTCAGCTCAGATATATAACCTCTTC
CTGTAGAGATCTCAGCATGACAGACCAGGCCACCG

ACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGCTTTGTGACTTCACTGTAGAATT
CCCTCCATGGAGATGAGCTGCATGAAAAAACAGCAGGTTTCTGTTTCAGC
TCTAGTTTGGTTGTCCTTGGTTAAATGTTTGTTTCTTGGATTAAGGTTTC
AGAGAGTTCAGTGCCTAGTCACTGGGCCCTATGTACATAGCTCAGACAAT
GACATGGAGTTGTGCCATAGAAGAATGTCTTTAGTTCTTGGTGGTGCAGA
AGCAAAGAGAATACCTGCCCACCTTGGCAGTCTCATCCCTCCCCTCTTTT
TCCATCTGTATACCAAGCCCATGGGAAGGTGCTGTTCCCACTCAGGGTAG
GTCTTCCCCATTTAGTTAATCCTCCCTGGAAAATATTCTGATTGGTAATG
TGCCTTATCTCCTAAGTTTTTCTCAATCCAGTCAAAATGAACCGACACAC
TTGATAGATAGGTGTACAATTATTTGAACTCCTGTGACTATCCATACGAA
TCCATTGAACACTTGGAGTGGTACATTGTCTTGGCATACCACTGCTATAT
ATCCTGTCTTTTAATTCTGTTTTCCATCATCCCCTGCTTACACCCATGCT
CCGCAGAATGTGGCTTTCAGCATACAGCAACTTATTA

Query= MSMg01no078_p12.b1 MSMg01no078_p12.b1 CHROMAT_FILE:
MSMg01no078_p12.b1 PHD_FILE: MSMg01no078_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:27 2005
         (611 letters)



>mm_chrX_146651234_146652245
          Length = 1012

 Score = 1129 bits (584), Expect = 0.0
 Identities = 602/608 (99%), Gaps = 1/608 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacttgcttctcaagttaggaaa-atttacagttctatattataaatacacacaa 63
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 812 gaattcacttgcttctcaagttaggaaacatttacagttctatattataaatacacacaa 753

                                                                       
Query: 64  attatcattcagttcttgtcatgctctttcctgataaaggtcttcattacaggttccatt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 752 attatcattcagttcttgtcatgctctttcctgataaaggtcttcattacaagttccatt 693

                                                                       
Query: 124 ttccccacatttgtaccattagttcattgaggctctctttccacctactgtgaagcctgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ttccccacatttgtaccattagttcattgaggctctctttccacctactgtgaagcctgc 633

                                                                       
Query: 184 tggcctgtgatgcttcttcaggtgctgtctttcttctgtcctgtgattctaagctgctgt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tggcctgtgatgcttcttcaggtgctgtctttcttctgtcctgtgattctaagctgctgt 573

                                                                       
Query: 244 ctgcaatccttcatgccacctagtctttggcagcttcttttttacatctgcttgctccac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctgcaatccttcatgccacctagtctttggcagcttcttttttacatctgcttgctccac 513

                                                                       
Query: 304 ttactgttggcatctgccgccttgctttgctatagcttccaagggagaactcaatatggg 363
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 512 ttactgttggcatctgctgccttgctttgctatagcttccaagggagtactcaatatggg 453

                                                                       
Query: 364 gcacctgccaacctgaagcacagaaacatttaaattgccaagcattgcctccagaggtgg 423
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 452 gcacctgccaacctgaagcacagaaacgtttaaattgccaagcattgcctccagaggtgg 393

                                                                       
Query: 424 aatgttcttgtgcgtctgtacagtgctctccagaactccttccacctccacttctctggg 483
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aatgttcttgtgcatctgtacagtgctctccagaactccttccacctccacttctctggg 333

                                                                       
Query: 484 catcactggattgtcatgttcgtggatactttgcaaaactgtgtgggtggcctctgtgtt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 catcactggattgtcatgttcgtggatactttgcaaaactgtgtgggtggcctctgtgtt 273

                                                                       
Query: 544 tctcttcctcctctaccttttatccattaggatatctattcagctcagatatataacctc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tctcttcctcctctaccttttatccattaggatatctattcagctcagatatataacctc 213

                   
Query: 604 ttcctgta 611
           ||||||||
Sbjct: 212 ttcctgta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1012
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1002
Effective search space:   602202
Effective search space used:   602202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)