XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CTAAAACTCTGCGAATTTGGGGCACCTGTGAGGAATTTTTTTTCCTGATT
TGATTATGTGAGATAGGAACGACCAACCCCAAATGTAGATCGTTTGTTCT
GTTATAGAAACAACACTACAATATACATTTCATTGATGCTAGTTTTTTAA
TAAAAGTGTGTAGCTAGGACTAAATTCTAGTAGTTTCAATCAAGATCGTT
TTTATGATCTTACACTGTTTCTGTCTTTTATTACAGTGTTCCCTGAGCAC
TGAGGGGGAGATTTGATGGTGACCTCCCTTGTGGGACTGAATGTTAGAAG
GTCCCTCAGGCTTTACATATTATCTGGCTGCAAGTCTCTGTATTTGTTTC
CATCTGCTGCATGAGGATACTTCTGTGATGATGAATGAGCAAGATACAGA
TCTATGAGTATAGCAAAATGTCAACAGGAGTCATTTATTTGCTATACTCC
TTTAGTAGAATAGTAGTATTTGGTCTTTCTCTAGATCCCTGGNATTTCTA
GTTTCAAGTTCTTGGCCATTCAGGCATTGTTGAGTATGGATTCCACTTAA
TGATATCTGTGATTGTTTGTATATGCTTGGCACAGGGAATGGCGCTATTA
GGAGATGTGGTCTTGGAGTAGGTGTGTCACTATAGGTGCGGGCTTAATAC
CTTCATCTTACCTGTGAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTAGGACAGCCAGGGATACACAGAGAAACACAGTCT
TAAAAAAAAACAAAAACAAAAAAAAAACAAAACAAAACAAAACAAAACAA
AAGAAACAAAAAACAAAAAAAAAAACAAAAAAAAACAGAAAGAAAAGTAT
TAGAGAAATTTTGGCTTCTTGTGTATTATTTTTAGATGTCTATAGGTTTT
TGGAAGGGTTTGTAGAGTTTTTAGAAGAGTGTTTTAGAGTTTTTTTGGTT
TAATGCCTTCCTGTGTATTTTTAGTGATTTTCCTCGTTCTTTGGCTTGTC
TGCTACTTAACAACCCCCCCCCCCAAAATAATACATACCTTCGCTCTCTT
ACTCTCTATCCGCCCCCCCCCTCCCTAGTATCCTCCCAACCCCTCAAATC
TGCCAAGCTCACTTTCCTTATAACCTATTCCCCTCCTTTCCCTCATTCCC
TCATTATCTCCTTCCATCCCCCTCTTCTCTTCTTACCGCTTCATCATACC
TCCCACCTCTACATCCCCTTCTCCTCTGTCCTTCTCCTACCCTTCGCCCC
TTTCTCTTACACCTCTCCACTTCTCTCCTCCTCTATACAATTATCTGTTC
CCCCCCAATTACCACCACTGCATCACTCCCTCGCCCTTGCATATTCCTTT
TCTGCATTCCCCCATCATTCCTTCACCCTTACACCCCCTACTCTCCTTCC
CC

Query= MSMg01no079_f14.b1 MSMg01no079_f14.b1 CHROMAT_FILE:
MSMg01no079_f14.b1 PHD_FILE: MSMg01no079_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:57 2005
         (601 letters)



>mm_chrX_122666914_122667914
          Length = 1001

 Score = 1015 bits (525), Expect = 0.0
 Identities = 581/602 (96%), Gaps = 5/602 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactaaaactctgcgaatttggggcacctgtgaggaa----ttttttttcctga 59
           ||||||||||| ||||||| ||| |||||||||||||||||||    |||||||||||||
Sbjct: 201 ggaattcactagaactctgagaaattggggcacctgtgaggaattttttttttttcctga 260

                                                                       
Query: 60  tttgattatgtgagataggaacgaccaaccccaaatgtagatcgtttgttctgttataga 119
           ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||
Sbjct: 261 tttgattatgtgagataggaa-gtccaaccccaaatgtagatcgtttgttttgttataga 319

                                                                       
Query: 120 aacaacactacaatatacatttcattgatgctagttttttaataaaagtgtgtagctagg 179
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacaactctacaatataaatttcattgatgctagttttttaataaaagtgtgtagctagg 379

                                                                       
Query: 180 actaaattctagtagtttcaatcaagatcgtttttatgatcttacactgtttctgtcttt 239
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 actaaattctagtagtttcaatcaagatcgtttttatgatcttatactgtttctgtcttt 439

                                                                       
Query: 240 tattacagtgttccctgagcactgagggggagatttgatggtgacctcccttgtgggact 299
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 tattacagtgttccctgagcactgagggggagatttgatggtgacctcctttgtgggact 499

                                                                       
Query: 300 gaatgttagaaggtccctcaggctttacatattatctggctgcaagtctctgtatttgtt 359
           |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 500 gaatgttagaaggtccctcaggctttgcatattatctggctgcaattctctgtatttgtt 559

                                                                       
Query: 360 tccatctgctgcatgaggatacttctgtgatgatgaatgagcaagatacagatctatgag 419
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 tccatctgctgcatgaggatacctctgtgatgatgaatgagcaagatacagatctatgag 619

                                                                       
Query: 420 tatagcaaaatgtcaacaggagtcatttatttgctatactcctttagtagaatagtagta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatagcaaaatgtcaacaggagtcatttatttgctatactcctttagtagaatagtagta 679

                                                                       
Query: 480 tttggtctttctctagatccctggnatttctagtttcaagttcttggccattcaggcatt 539
           |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 680 tttggtctttctctagatccctggcatttctagtttcaggttcttggccattcaagcatt 739

                                                                       
Query: 540 gttgagtatggattccacttaatgatatctgtgattgtttgtatatgcttggcacaggga 599
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttgagtatggattccactcaatgatatctgtgattgtttgtatatgcttggcacaggga 799

             
Query: 600 at 601
           ||
Sbjct: 800 at 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)