XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAGATCCGCGGAATTCAA
TTCCTACCGTCTTGTGAATGACACAGAACAGAAAGTGTCTCTGTAGGAGG
ATGTGGAGTTCTTTGTTTTTGTGCCTTAGAGTGGTATATATGGGTCATAT
GGTAGTCCTAATTTTCAGTCTTATAAGAAGCCTCTACACTGATTTCTATA
GTACCTGTTTTGTTTTTATATTCTCATCAAGAGTGGATAAAAGTTTTCCT
TTCACCATATCCTTACCAGCTTTTGTTGTCATTTGTTCTCTTGGTGGTAT
GACCATTCTGACTGATGTTAAAGATGGAGTCTCAAAGGAGCTCTAATTTG
CAAAATCTCATGTCTAGAGATATTGAATATGTCTTAAATATTTAAATGAG
AAAAGTTGACAATATCATGCCTGTATACACCCCATTGTGGTCCACCCTAC
TAACCTCTCCTCTTTCTGGGTAGTTCACTTGGTTTCCAGTACTAGGTATG
ATTTCCCTCTTGTTGAGCAGGTCTTATGTCCAGCTATTGGCTACCATGAA
GTTATATGTCCCACTAATGCACTCTTAAGGTTATGTTGCCATGTTGGTCA
TTGCGGCACACAGGTAACCTAACTAGACATTTACATGGTGCCTTCTGGTG
CCACATAAGCTGTCCCTCCAGAGGAGGCATCCATATCCGTTCCAGATTAG

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAGAGAATATACTTAGGGTAAAATCCTAACTCA
AATCTAAAACCTGCATTCTACAAAGTCTGTTTTACACACTGTCCCTGGTA
GATATCTTTTACAATTCCAGTGTACATACTCAGAGATGACTTTCTGTCTC
TCTATGGCTGGGACAAAAATGAGAGTGACCTTTCATTGGTTATTCATCCA
AACAGGGAGTTCTGGGCATGTGGGGAGGTAGAACGCTGGAAGCAAAGAAA
GAATTCTTGAACTAAGTAATTAGTTGATTTTACAGGTTATATGAACTGCA
GAGCTAGAGAAGATGCCCTTTTGTACTGGGATTCTTCATGTCTTTTTTTT
TTCCAGTGCTTATATTTTATTCACTATTCTATTAAAAACAGATTTTTCAT
ACACTCTATTCTGATCAAAGTTTCCCATCCCCCAATTCCTTTTCCCCTCC
CCATCCAGTAAAATCTATAATCCTTTAATATTCTCCTTATAACACGAATA
GGTAACTTGCATTAATAAACCCCGTTAAATATAGCCAAAGAAAAGGGACG
AGAAACCCTCCGATGTTCTTTTATTTGCCCCTATTTTCTCACTAACTTTT
TTCCTGACCCTCGCATATTGTAATTATATTTCTTGAATGCTAATGCCACC
AT

Query= MSMg01no080_c13.g1 MSMg01no080_c13.g1 CHROMAT_FILE:
MSMg01no080_c13.g1 PHD_FILE: MSMg01no080_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:58 2005
         (437 letters)



>mm_chrX_82848365_82849202
          Length = 838

 Score =  793 bits (410), Expect = 0.0
 Identities = 431/438 (98%), Gaps = 1/438 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagaatatacttagggtaaaatcctaactcaaatctaaaacctgcattctacaaagtct 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 559 agagaatatacttagggtaaaatcctaactcaaatctaaaatctgcattctacaaagtct 500

                                                                       
Query: 61  gttttacacactgtccctggtagatatcttttacaattccagtgtacatactcagagatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gttttacacactgtccctggtagatatcttttacaattccagtgtacatactcagagatg 440

                                                                       
Query: 121 actttctgtctctctatggctgggacaaaaatgagagtgacctttcattggttattcatc 180
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 439 actttctgtctctctatggctgggacaaaaatgagagtgaactttcattggttactcatc 380

                                                                       
Query: 181 caaacagggagttctgggcatgtggggaggtagaacgctggaagcaaagaaagaattctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaacagggagttctgggcatgtggggaggtagaacgctggaagcaaagaaagaattctt 320

                                                                       
Query: 241 gaactaagtaattagttgattttacaggttatatgaactgcagagctagagaagatgccc 300
           |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 gaacaaagtaattagttgattttacaggttatatgaactgcagcgctagagaagatgccc 260

                                                                       
Query: 301 ttttgtactgggattcttcatgtc-ttttttttttccagtgcttatattttattcactat 359
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 259 ttttgtactgggattcttcatgtctttttttttttccagtgcttatattttattcactat 200

                                                                       
Query: 360 tctattaaaaacagatttttcatacactctattctgatcaaagtttcccatcccccaatt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tctattaaaaacagatttttcatacactctattctgatcaaagtttcccatcccccaatt 140

                             
Query: 420 ccttttcccctccccatc 437
           ||||| ||||||||||||
Sbjct: 139 cctttccccctccccatc 122


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 838
Length adjustment: 9
Effective length of query: 428
Effective length of database: 829
Effective search space:   354812
Effective search space used:   354812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)