Query= MSMg01no081_m21.b1 MSMg01no081_m21.b1 CHROMAT_FILE:
MSMg01no081_m21.b1 PHD_FILE: MSMg01no081_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:07 2005
(399 letters)
>mm_chrX_57099348_57100146
Length = 799
Score = 497 bits (257), Expect = e-145
Identities = 266/269 (98%)
Strand = Plus / Plus
Query: 1 ttcttgagttgtcaattcattattagaagttatattaataaaataagtttcagtctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttgagttgtcaattcattattagaagttatattaataaaataagtttcagtctttct 260
Query: 61 caagtgtatatgtgtgcatgtgtatgtggctaagggcagggcatgttaaggcattctttg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 caagtgtatatgtgtgcatgtgtatgtggttaagggcagggcatgttaaggcattctttg 320
Query: 121 aacacttagcagtaataactatgccttagccttcacttcctttttgcacagaaaatgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacttagcagtaataactatgccttagccttcacttcctttttgcacagaaaatgagt 380
Query: 181 gccagctgaaaagtatagcacttttttatgtttatgttgggtaaaaccaaaatatgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagctgaaaagtatagcacttttttatgtttatgttgggtaaaaccaaaatatgtgtt 440
Query: 241 aggaataagttcatattttggaaatttct 269
||||||||||||| | |||||||||||||
Sbjct: 441 aggaataagttcaaactttggaaatttct 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_m21.g1 MSMg01no081_m21.g1 CHROMAT_FILE:
MSMg01no081_m21.g1 PHD_FILE: MSMg01no081_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:07 2005
(450 letters)
>mm_chrX_57227060_57227910
Length = 851
Score = 795 bits (411), Expect = 0.0
Identities = 441/451 (97%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 1 ttcatcttgttttatttatagtttttaaaagaatatcttataatttttatagcaatcact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttcatcttgttttatttatagtttttaaaagaatatcttataatttttatagcaatcacc 460
Query: 61 gagggtattaaaatattgttatgtcacttgctgtagtctgttgtattagtattttaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gagggtattaaaatattgttatgtcacttgctgtagtctgttgtattagtattttaacac 400
Query: 121 ttcaagtgaagtgtgaaatcttgctttgattttggtgccttaaccttcttaactcttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcaagtgaagtgtgaaatcttgctttgattttggtgccttaaccttcttaactcttaga 340
Query: 181 tattattttgttggtaagcagatggtatattttttattttttt-gttttactttgtattt 239
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 339 tattattttgttggtaagcagatggtatattttttattttttttgttttagtttgtattt 280
Query: 240 gcttatgtttaaattattacacagagtaataggtggataatgattcttcctgaagccata 299
| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 279 gtttatgtttaaattagtacacagagtaataggtggataatgactcttcatgaagccata 220
Query: 300 ggccattaaatgcaaatcttatgttaagctttggaaattttcatatgatttttaaaaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggccattaaatgcaaatcttatgttaagctttggaaattttcatatgatttttaaaaaat 160
Query: 360 ttattcactttacatcccgctcactgccccacttccagtcactccttcccacaatccttc 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 159 ttattcactttacatcccgctcactgccccactttcagtcactccttcccacaatccttc 100
Query: 420 ccccctcccatatcccttgctcctctgagca 450
|||||||||||||||| || |||||||||||
Sbjct: 99 ccccctcccatatcccctgttcctctgagca 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space: 370040
Effective search space used: 370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
