Query= MSMg01no084_c22.b1 MSMg01no084_c22.b1 CHROMAT_FILE:
MSMg01no084_c22.b1 PHD_FILE: MSMg01no084_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:08 2005
(544 letters)
>mm_chrX_139640692_139641633
Length = 942
Score = 420 bits (217), Expect = e-121
Identities = 230/235 (97%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 5 gaattccataggtggggcatggaaggaattttatagatgagagagaaatgtgtaagcaat 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattccataggtggggcatggaaggaattttatagatgagagagaagtgtgtaagcaat 264
Query: 65 gtaaataccatactcatgcatggaatttttttaaagattttaaagctttaaattaatttt 124
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 265 gtaaataccatactcatgcatggaatttttt--aagaatttaaagctttaaattaatttt 322
Query: 125 ttttgaaaccagatttcactatgtatcccaggctggtatggagtttgctatcctcctacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttttgaaaccagatttcactatgtatcccaggctggtatggagtttgctatcctcctacc 382
Query: 185 tccatttatctaacttgatactatgttctttaattctcacaaaaagctctatgaa 239
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 383 tccatttatctaacttgatactattttctttaattctcacaaaaagctctatgaa 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 942
Length adjustment: 10
Effective length of query: 534
Effective length of database: 932
Effective search space: 497688
Effective search space used: 497688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_c22.g1 MSMg01no084_c22.g1 CHROMAT_FILE:
MSMg01no084_c22.g1 PHD_FILE: MSMg01no084_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:09 2005
(379 letters)
>mm_chrX_139759147_139759925
Length = 779
Score = 702 bits (363), Expect = 0.0
Identities = 375/379 (98%)
Strand = Plus / Minus
Query: 1 cagacagtgatgaaaaatggttctaaagcaccagaaaaggaagtacttggagcattccaa 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 579 cagacagtgatgaaaaatggttctaaagcaccagaaaaggaagtgcttggagcattccaa 520
Query: 61 gagtctgaggaacactgtggttggaataaggtaactgtggctgaaactggcaagagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gagtctgaggaacactgtggttggaataaggtaactgtggctgaaactggcaagagatga 460
Query: 121 gatggggctgaggagaagaacagaagttaggacatgcaagttgttagtgccctgggaaac 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 459 gatggggctgaggagaagaacagaagttagaacatgcaagttgttagtgccctgggaaac 400
Query: 181 cagtggaatcttgtgagcaagagcactgcatggtcccattgaaaagggctcagtggctct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 399 cagtggaatcttgtgagcaagagcactgcatggttccattgaaaagggctcagtggctct 340
Query: 241 tttgtccaggttgtagtaaagggaggcagtaatacaggagaggcctgaaaggttgggaga 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 339 tttgtccaggttgtagtaaagggaggcaataatacaggagaggcctgaaaggttgggaga 280
Query: 301 gtaacctttccaacatggaaggaggtcgcttgctctgggatcacaatgcagagttgtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtaacctttccaacatggaaggaggtcgcttgctctgggatcacaatgcagagttgtcct 220
Query: 361 aagtacagcctgtgggatc 379
|||||||||||||||||||
Sbjct: 219 aagtacagcctgtgggatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
