Query= MSMg01no084_m21.b1 MSMg01no084_m21.b1 CHROMAT_FILE:
MSMg01no084_m21.b1 PHD_FILE: MSMg01no084_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:56 2005
(581 letters)
>mm_chrX_81479153_81480133
Length = 981
Score = 1093 bits (565), Expect = 0.0
Identities = 574/577 (99%)
Strand = Plus / Minus
Query: 5 ggaattcatctaattaacattcacactatatccatgagaagtcagtgggcagtgaaatat 64
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggaattcatctaattaatattcatactatatccatgagaagtcagtgggcagtgaaatat 722
Query: 65 gttcataggtggctatgaagtcaactcccattccattcagggagaaggcaagaataaacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttcataggtggctatgaagtcaactcccattccattcagggagaaggcaagaataaacc 662
Query: 125 cagtaccataatgcaaaattcagggcttatgtagtataatgctgtgagttttcagtgatg 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 661 cagtaccataatgcaaaattcagggcttatgtagtatactgctgtgagttttcagtgatg 602
Query: 185 aaattacattagagcaaacttgcagaagaaatttgatacattattcgagttatgattttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaattacattagagcaaacttgcagaagaaatttgatacattattcgagttatgattttt 542
Query: 245 tcattatttcaaacattcaaatactttaaaaatatatgtgttactttaaaaatcctgtaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcattatttcaaacattcaaatactttaaaaatatatgtgttactttaaaaatcctgtaa 482
Query: 305 aatctctagatgtcctagaagtatagaaaggcagacaaaatatgatttaactgtggtgct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatctctagatgtcctagaagtatagaaaggcagacaaaatatgatttaactgtggtgct 422
Query: 365 tctttagaacatactatagttacaatgcttttcttatacacaatatgaatgagcattgtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctttagaacatactatagttacaatgcttttcttatacacaatatgaatgagcattgtt 362
Query: 425 aataaatctggtagttttaaatgggcttaactgtcaaaatgtgtgactgtgcccttttcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aataaatctggtagttttaaatgggcttaactgtcaaaatgtgtgactgtgcccttttcc 302
Query: 485 tcaagcagattgataagtggaattaattttaattatgtccccagaaaattattaattaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaagcagattgataagtggaattaattttaattatgtccccagaaaattattaattaaa 242
Query: 545 cttgtatctattgacacatttctatggaatggaggat 581
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgtatctattgacacatttctatggaatggaggat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_m21.g1 MSMg01no084_m21.g1 CHROMAT_FILE:
MSMg01no084_m21.g1 PHD_FILE: MSMg01no084_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:56 2005
(467 letters)
>mm_chrX_81393276_81394143
Length = 868
Score = 843 bits (436), Expect = 0.0
Identities = 460/468 (98%), Gaps = 1/468 (0%)
Strand = Plus / Plus
Query: 1 aaagaattaatgttcttcactaagtatctttcactgggg-aaaaaaaatcacggcaattt 59
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 201 aaagaattaatgttcttcactaagtatctttcactggggaaaaaaaaatcacagcaattt 260
Query: 60 gccaattaaggcaagaaagaaggtatttagagtcatgaatagtgggcaaaggagctaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccaattaaggcaagaaagaaggtatttagagtcatgaatagtgggcaaaggagctaaga 320
Query: 120 aggttgtttctttcacttagtcaaataaacataattcatctccaatctttattttaaaat 179
||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aggttttttctttcacttagttaaataaacataattcatctcctatctttattttaaaat 380
Query: 180 actaaatgaagtgaataatatattttgtaatatttgatttttctcataatggctgtgtga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actaaatgaagtgaataatatattttgtaatatttgatttttctcataatggctgtgtga 440
Query: 240 ttatttctgttggtacatttaaacttctctgcatccaggttatttattcattggctggtt 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ttatttctgttggtacatttaaacttctctgcatccaggttatttatttattggctggtt 500
Query: 300 ttgggtgaattccaaacttttatcatcaaagtcagtgtccagtagcagggataaatgaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgggtgaattccaaacttttatcatcaaagtcagtgtccagtagcagggataaatgaca 560
Query: 360 aaactctacaatagatactgaatgaaatggtaaggttgcaataaattctttttccataat 419
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 561 aaactctacaatagatactgaatgaaatggtaaagttgcaataaattatttttccataat 620
Query: 420 tcattagattgtttaatagctgatttctctttactaatatacaattaa 467
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcattagattgtttaatagctgatttctctttactaatatacaattaa 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 868
Length adjustment: 10
Effective length of query: 457
Effective length of database: 858
Effective search space: 392106
Effective search space used: 392106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
