Query= MSMg01no086_a19.b1 MSMg01no086_a19.b1 CHROMAT_FILE:
MSMg01no086_a19.b1 PHD_FILE: MSMg01no086_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:37 2005
(643 letters)
>mm_chrX_85191214_85192256
Length = 1043
Score = 1176 bits (608), Expect = 0.0
Identities = 632/640 (98%), Gaps = 1/640 (0%)
Strand = Plus / Plus
Query: 5 gaattcttctataagtttctcctgatgtaatgcagcgtcatgttcagtgacctcacaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttctataagtttctcctgatgtaatgcagcgtcatgttcagtgacctcacaaag 263
Query: 65 tg-aaaaaaattaaagtaacagtataaagattcagaagcaggcgcatgaattaagagcat 123
|| ||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||
Sbjct: 264 tgaaaaaaaaataaagtaaaagtataaagattcagaagcagacacatgaattaagagcat 323
Query: 124 ttactgttcttgctgagggtttgcattaaatttcctacaacttcatggaggctgaaaatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttactgttcttgctgagggtttgcattaaatttcctacaacttcatggaggctgaaaatt 383
Query: 184 gtgtataactcctgatctaaggaatgttattccttttctggtcttcaggggcaccaaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtataactcctgatctaaggaatgttattccttttctggtcttcaggggcaccaaata 443
Query: 244 tgtatatggtacacagataaacacattaaaatatatgtcattaaaaatgaaaactagttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtatatggtacacagataaacacattaaaatatatgtcattaaaaatgaaaactagttc 503
Query: 304 ctatataaaaggcctcatatggtttctgattttggcttggtgatatcaaaatttatcact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 504 ctatataaaaggcctcatatggtttctgattttggcttggtgatatcaaaatttatcgct 563
Query: 364 cttttagaaggacacagcagtatatctctgcacttaaaagcaccatgaatctttaattta 423
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 564 cttttagaaggacacagcagtatatctctggacttaaaagcaccatgaatctttaattta 623
Query: 424 atggcttgatgatcattccattatgtgccatgaaaaatattcacccaggtctcttgcact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atggcttgatgatcattccattatgtgccatgaaaaatattcacccaggtctcttgcact 683
Query: 484 tactatgtaaaattatccttcaaaggggttttacctggagtctgcaaagtgacttcaatc 543
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 684 tactatgtaaaattatccttcaaaggggtttttcctggagtctgcaaagtgacttcaatc 743
Query: 544 atgctagagtacatatcttagttggatcaggccctggttcccatctatgcactaccacca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atgctagagtacatatcttagttggatcaggccctggttcccatctatgcactaccacca 803
Query: 604 atataattaacagataaacatgattgaccaagaaaatgca 643
||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atataattaacagataaacatgattgaccaagaaaatgca 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_a19.g1 MSMg01no086_a19.g1 CHROMAT_FILE:
MSMg01no086_a19.g1 PHD_FILE: MSMg01no086_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:38 2005
(623 letters)
>mm_chrX_85299558_85300580
Length = 1023
Score = 1120 bits (579), Expect = 0.0
Identities = 591/595 (99%), Gaps = 2/595 (0%)
Strand = Plus / Minus
Query: 30 ctaacatcactttgctttggaattcatggccctcacctctatcgctacacagcccaggtt 89
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1023 ctaacatcactttgctttggaattcatggccctcacctctattgctacacagcccaggtt 964
Query: 90 cagttccttgtgctcgtacttattagatctcagacctttttcatgttactttgaaattct 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 cagttccttgtgctcgtacttattagatctcagacctttttcatgttactttgaaattct 904
Query: 150 gtgccccagtttcctcatcctttaaaatccagtagtgaaaatatgcttaataaagttgtc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gtgccccagtttcctcatcctttaaaatccagtagtgaaaatatgcttaataaagttgtc 844
Query: 210 ataatccgtaagtgaaatgagctttgtagaatcccgacaaaactccccacaaaacctgtt 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ataatccgtaagtgaaatgagctttgtagaatcccgacaaaactccccacaaaacctgtt 784
Query: 270 agtaaaggaattatggaaagataaactagtgactcatcagaactttgattgcctttgtga 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 agtaaaggaattatggaaagataaactagtgactcatcagaactttgattgcctttgtga 724
Query: 330 agggagaaggcagggtaagaattgattgagaattgtaagtttcatttaagtaagttggct 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agggagaaggcagggtaagaattgattgagaattgtaagtttcatttaagtaagttggct 664
Query: 390 ttaaatatcaggaactttagtctacca-gcaccatattctgtattagcccaagcactact 448
|||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 663 ttaaatatcaggaactttagtcta-caggcaccatatcctgtattagcccaagcactact 605
Query: 449 aaaatgagggtggactttaatatggctggctaagtcagtgtcaataagattgagcactct 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaaatgagggtggactttaatatggctggctaagtcagtgtcaataagattgagcactct 545
Query: 509 gtgattggtaaaccctcaaaaaactggacagagagctattgaaagtccaattattaaaac 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gtgattggtaaaccctcaaaaaactggacagagagctattgaaagtccaattattaaaac 485
Query: 569 tacatttgctccactgaaaagttgataggtctttgggaaagtcactgtgaaaaat 623
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tacatttgctccactgaaaagttgataggtctttgggaaagtcactgtgaaaaat 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
