CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCAACTCAATTCCTCATAGAGTTAGAAAGAGCAATTTGCAAATTTATTTG
GAAGAAAATAAACCCAGAATAGAGAAAACTATTCTCAACAATAAAAAACG
TATTGGGTGAATCACCATCTCTGACCTCAAGCTGTATTACAAAGCAATAG
TGTTAAAAACTGCATGTTATTTGAACAAAGACAGGCAGGTAGATGGAACA
GAATTGAAGACCCAGAAATGAACCCACACACCTATGAACCACACAACTAT
GGTCACTTGATTTTTGACAAAGGAGGTAAAACCATCCAGTGGGAAAAAAG
ACAGATTTTTTTTTTAAAAATGGTGCTTGTTCAACAGGAGTTAGTCATGT
AGAAGAATGCTAATTGATCGATTCTTATATCCTTGTAAAAAAGCTTGAAT
CCAAGTGGATTGAGGGCCTCCACATAAAACAAGATACACTGAAGCTAATA
CAAAAGACAGTGAGGAAGAGCCTTGAATACAAGAGCACAGGGGGAATTTT
CCTGAGCAGAACATCAATGGCTTATGCTTTAAGATCAACAATCAACAAAT
TTGAATTCTTAAAGTTCCAAAGCTATAAGGCAAAGGACACTGTCCAATAG
TGACAAAATGTCAACCAACAAATGGCGAAATTTACCAACCCTACTTCCG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGAAGGATGCATTCATTTACTAGTTCT
AAATGCAGTATGATACACTGTATTTTATATATGGTCAGATAACTATACTT
GTCATTAATTAAATGAAATTTCACAAAATATACATGGCTTAGCTGGTATT
TCCTTAAGCTGATTTTGATTTAAAGACCATAACATTGGTAGAAATGAGCA
GTAATAAACAGCAGAGTTGGCATTGCTGCTTCTAGTACAAAGTTTTCACC
AGTCATTGATTTATAAGGTGAAATCTATAGGAATCTTATTAATTCAGGAA
AACAGTAGTCAAAAAAATAAAGTTAAACATGGAAAAATGATTAAGAATGC
TATTAAAGATAATAGGCTATATTTATGTCTATTATTCTAAATGATCAAAT
CTTATTATAAAATATAATTCACCCTGAAATATTAAGAAATTACAAAAAAT
TTGAATACCAGTAATGGAAAGGTAAATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATACACCCCTCCCACCCATTTACCCACCTTCTATCCATCTTCTACCCCC
ATCCCTCCCCACTTTATCTATTCCTATACATATATACACACATACATTTT
TATTCATTCCACATATTTCC

Query= MSMg01no087_e13.g1 MSMg01no087_e13.g1 CHROMAT_FILE:
MSMg01no087_e13.g1 PHD_FILE: MSMg01no087_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:21 2005
         (522 letters)



>mm_chrX_141314747_141315669
          Length = 923

 Score =  870 bits (450), Expect = 0.0
 Identities = 471/478 (98%), Gaps = 1/478 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagaaggatgcattcatttactagttctaaatgcagtatgatacactgtattttatatat 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 cagaaggatgcattcatttactagttctcaatgcagtatgatacactgtattttatatat 260

                                                                       
Query: 61  ggtcagataactatacttgtcattaattaaatgaaatttcacaaaatatacatggcttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcagataactatacttgtcattaattaaatgaaatttcacaaaatatacatggcttag 320

                                                                       
Query: 121 ctggtatttccttaagctgattttgatttaaagaccataacattggtagaaatgagcagt 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtatttccttaagctgattttgatttaaagaccataacattggtagaaatgagcagt 380

                                                                       
Query: 181 aataaacagcagagttggcattgctgcttctagtacaaagttttcaccagtcattgattt 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 aataaacagcagagttggcattgctgcttctagtacaaggttttcaccagtcattgattt 440

                                                                       
Query: 241 ataaggtgaaatctataggaatcttattaattcaggaaaacagtagtcaaaaaaataaag 300
           |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 441 ataaggtgaaatctataggaatattattaattcaggaaaatagtagtcaaaaaaataaag 500

                                                                       
Query: 301 ttaaacatggaaaaatgattaagaatgctattaaagataataggctatatttatgtctat 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaacatggaaaaatgattaagaatactattaaagataataggctatatttatgtctat 560

                                                                       
Query: 361 tattctaaatgatcaaatcttattataaaatataattcaccctgaaatattaagaaatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattctaaatgatcaaatcttattataaaatataattcaccctgaaatattaagaaatta 620

                                                                     
Query: 421 caaaaaa-tttgaataccagtaatggaaaggtaaatatatatatatatatatatatat 477
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaaaaatttgaataccagtaatggaaaggtaaatatatatatatatatatatatat 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 923
Length adjustment: 10
Effective length of query: 512
Effective length of database: 913
Effective search space:   467456
Effective search space used:   467456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)