NNNNNNNNNNNNNNNNNNNAAAANNNNCCCCCCGNTNNNTCTTAATACNN
TTTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTAATGACCCGAGGAAACTTAGGAAGGGACTACCATGAG
GTCAAACTGCAAGCATAACACATTTTAATGAGTTTACAAACTAGTAACTT
TCCATCATTATGTTTTTTAATATAGCCTTAGTTTTGATTAATCCTCTCTT
CTTCATCTTGTCCCTCATTTACCCACACCTATCCCTGATTAAACTTTTCT
AAACCTAGTTTCCCATTTTTATAATCATATCATATGTGTCCATTTATATT
ATATTACAATAGCTGCAACTGCTTGTTTTCTAGCTCTAGTTGTTTAGTGC
ACCTTTCTCTACCACTTTACTTTGATATTGTATATATTTTTGATGTTAAG
ATACATTTCTTAGAGACCACAAAAGATCATCTTGACTTCTAATCCAGTCC
ATTAATTTGTGACTTTTATCTAATGTTTGTATTACTGATTATATTTGCCT
CTGTATTTGTCAGGCTCTGTCAGAGCCTCTCAGGAGACAGCTATATCAAG
CTATTGTCAACAAGCACTTCTTGTCTTCCAAAATAGTGTCTGGGCTTGGT
GACTGTATATGGTATGGATCCCCAGAAGTGGTAGACTCTGTATGGTCATT
CCTCCATACTTTGTTGCTATAACTCCTCCCATAGAAATTTTGTTTCCCCC
TCTAAGAAGGACTGAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGG
ATCAATTCGCATTCTTCTACATGATAACTACCAGTTGTGCCAGCACCATT
TGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCA
AAGATCAAGTGACCATAGGCTTGTGGGTTCATTTCTGGGTCTTCAGTTCT
ACTCCATTGGTCTATTTGTCTGTCCCTATAGCAGTGCCATGCAGTTTTTT
ATCACAATTGATCTGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCAAC
AGATATTCTTTTATCCTTGAGCAGAGTTTTTGCTATCCTAGGTTTTTTGT
TACTCCAGATGAATTTGGAGATTGCCCTTTCTAATTCGTTGAAGAATTGA
ATTGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTGCTTTTGGCAA
GATAGCCATTTTTACTATATTGATCCTGCCAATCCATGAGCATGGAAGAT
CTTTAAAACTTCTGAGATCTTCTTTAATTTCTTTCTTCAGAGACTTGAAG
TTTTTACCATATGAGTCTTTCACTACCTTAGAGTCTCACCAAGGATATTT
ACATTATCTGTGTGTATTGCATCAGGTGTTGTCTTCCCTATTA

Query= MSMg01no088_p19.b1 MSMg01no088_p19.b1 CHROMAT_FILE:
MSMg01no088_p19.b1 PHD_FILE: MSMg01no088_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:38 2005
         (511 letters)



>mm_chrX_94978593_94979503
          Length = 911

 Score =  949 bits (491), Expect = 0.0
 Identities = 503/507 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttaatgacccgaggaaacttaggaagggactaccatgaggtcaaactgcaagc 64
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaatgaaaggaggaaacttaggaagggactaccatgaggtcaaactgcaagc 264

                                                                       
Query: 65  ataacacattttaatgagtttacaaactagtaactttccatcattatgttttttaatata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataacacattttaatgagtttacaaactagtaactttccatcattatgttttttaatata 324

                                                                       
Query: 125 gccttagttttgattaatcctctcttcttcatcttgtccctcatttacccacacctatcc 184
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 gccttagttttgattaatcctctcgtcttcatcttgtccctcatttacccacacctatcc 384

                                                                       
Query: 185 ctgattaaacttttctaaacctagtttcccatttttataatcatatcatatgtgtccatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgattaaacttttctaaacctagtttcccatttttataatcatatcatatgtgtccatt 444

                                                                       
Query: 245 tatattatattacaatagctgcaactgcttgttttctagctctagttgtttagtgcacct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatattatattacaatagctgcaactgcttgttttctagctctagttgtttagtgcacct 504

                                                                       
Query: 305 ttctctaccactttactttgatattgtatatatttttgatgttaagatacatttcttaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctctaccactttactttgatattgtatatatttttgatgttaagatacatttcttaga 564

                                                                       
Query: 365 gaccacaaaagatcatcttgacttctaatccagtccattaatttgtgacttttatctaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaccacaaaagatcatcttgacttctaatccagtccattaatttgtgacttttatctaat 624

                                                                       
Query: 425 gtttgtattactgattatatttgcctctgtatttgtcaggctctgtcagagcctctcagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtttgtattactgattatatttgcctctgtatttgtcaggctctgtcagagcctctcagg 684

                                      
Query: 485 agacagctatatcaagctattgtcaac 511
           |||||||||||||||||||||||||||
Sbjct: 685 agacagctatatcaagctattgtcaac 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)