BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-089C06.T7 (MSMg01no089_c06.b1) | MSMg01-089C06.TJ (MSMg01no089_c06.g1) |
ACC | AG307715 | AG307716 |
length | 787 | 782 |
length of high quality (start - end) | 230 (132 - 361) | 152 (135 - 286) |
definition | CHROMAT_FILE: MSMg01no089_c06.b1 PHD_FILE: MSMg01no089_c06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:41:51 2005 | CHROMAT_FILE: MSMg01no089_c06.g1 PHD_FILE: MSMg01no089_c06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:41:51 2005 |
singlet/doublet | doublet | doublet |
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BLAST hit | unique | unique |
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Map location. | (80,966,688 - 80,966,912) | (80,819,780 - 80,819,930) |
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sequence | CGGTTTTCTTGTTTGCCCGTTTTCTTTTCTTTCTTTCCTCNNCCNNCCGN
CCCTAATACNCCNTTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCGCGGAATTCACATGCTTACCCTTTAAAAAAAAAAGTTT
CAAGGTAGGATTAATGGCTCTTGGACACTACAGAATTTCCCAATTTCTGA
TCAAATTCAAATGAGTAGTATTATTTGACAGAATCATTGTTGAATGTAGA
AAACATGAATGGTTAATGAGTAGCCCAATTTAAGAATGCTATGTACATTT
AGACAAAACAGAAGTATTGTTTTTTATCTTTTCATCATAATTTTGATACT
TCTATATGTTAGCACAAAAAACGTATTGTTCCATGGCTTCCTGATATTAA
TGTTTGTTTGTAGCAACCATTATTCAATATATTATGTGCCCGCCCGCCCA
ATTATTTGCTTTTTACCATTTTCTTGTTCATTTGCCCCTAAATAAAGAAC
ACTCATCTTGTTTACTTTACTTCGGCAATCAAACTTCCCACCTTTTGAGT
ATACGTCTTCTAAAGTTCTTTCATAATCCCATTACTATAGGACCCCTGTC
ATTGAATACGATATGTATTTTTCTTATACTCTCTGTGACGATTTTCTGAA
CCTTCTTTGTGTCCCACTTACTACATCCTTGTTCTTTTTCCTAACTTTTA
TAATTGTTTGCTTCACGTTTCTGCTCAGCCCTTTTTCCTTTTTTTCGCCA
CTATTTTAACCCTTATCACTTCATCTCCCTATCCCCG
| TTTTTTTGTTGTTGTGGGTTTCGTCCTGTTATCCTCCTNCCCCNCCCCTT
TCNNNCTTTTCTATGATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGCCAAATGATTTCT
CAAATGATAATTAGAGAAGTTTCTGTGACAATCACGATATTGGACATTTG
TTTTCTCTTTTCCCATCTGCTGAGTCACAATTCTCAGACAGTAGAGGGTA
TAGTGGTTTCTCCAATCCTTATAGTTTATACTTAACGCTTTGCGAGGAGA
GATCATACCTGTATTGCACAAAATACTGTATTTGCTACTTCTTTTCATTG
GCTATTTGTAAAGGGGTAGACTATTTGCCTTGTTTACCTGCATAACCTGT
TAAATCTGAGCCCCATCATTTTTTTTTACCCCCCCCTCCCCCACCCCTTT
AACTTATCTGTGTACTGCACGCTGTTTCTTCCTACGAAATCATGAAAACC
TGTTTTTGAATAAGGCCACGTCCTAACATCTGTCATAGTAATAACACCTT
ATTCTTGATTGAAAAAAAAACACCGTTAAGCCTTTACACTGCTTGCTCAT
CCCCGCTAATAACTGACTTATTTCTCGCTAGTTTTTCCAACAACACGTGC
CCTGTTTTTTCACCTTCCTTTTCTATGTTCTTTTACTCGCCTCCCGTTTT
TCGCGCAATTGACCACCCGATATCTTTATTTTTTCCCTTCTTCCCTCTAT
TTTTCCCCACTCTTTGTCCCTTTTTCCCACCC
|
quality values | Open.Hide. 7 10 8 8 9 9 9 12 10 9 9 9 8 8 8 8 8 8 10 11 15 13 11 7 6 10 10 11 12 11 9 9 9 9 14 9 10 10 10 3 0 0 3 3 0 0 3 11 3 0
3 15 7 8 8 10 10 10 3 0 3 3 0 3 9 9 9 12 12 9 10 10 11 11 23 23 34 34 25 21 22 29 31 27 30 33 33 29 29 37 39 35 32 36 36 36 36 30 28 13
12 10 10 10 23 23 19 14 8 8 10 23 25 33 33 20 24 19 19 10 8 8 15 17 22 11 12 11 11 11 12 16 24 39 30 39 36 39 39 48 48 48 48 48 36 36 36 36 34 37
39 39 39 39 35 35 42 32 36 36 40 37 36 39 39 39 39 40 43 43 43 43 33 34 34 42 38 57 48 48 37 37 33 33 22 21 15 12 10 10 10 13 19 23 37 37 47 37 37 37
37 37 36 37 37 43 43 37 37 37 43 40 40 33 31 36 36 42 34 42 43 43 48 54 54 54 48 54 48 47 41 41 42 42 43 42 39 39 35 35 39 42 47 44 44 32 32 19 19 13
24 24 42 42 47 44 46 43 42 42 37 37 35 24 24 11 11 11 24 24 20 13 13 13 26 32 50 48 48 50 47 43 35 35 35 43 43 52 52 52 57 57 52 52 52 52 52 52 38 38
13 13 12 28 28 37 43 35 35 35 37 41 41 41 41 44 43 43 33 34 35 41 43 43 52 52 52 52 59 57 52 52 50 50 50 35 35 35 42 43 43 44 50 50 50 43 43 43 44 59
42 35 35 42 42 42 35 33 28 24 15 12 12 11 11 11 18 18 19 25 12 12 12 18 19 24 24 20 31 31 37 36 41 21 18 13 12 15 18 16 25 26 23 42 42 29 28 21 21 16
16 12 12 13 24 15 18 18 26 18 19 13 14 17 18 28 37 39 39 35 37 32 25 16 12 12 12 10 8 8 8 8 9 9 12 12 9 9 9 9 9 9 9 10 9 9 8 8 8 8
9 12 19 30 30 43 37 37 28 28 28 37 37 30 26 17 14 14 23 23 30 32 34 24 14 13 12 9 9 10 15 11 14 14 15 13 19 9 9 9 6 8 6 6 8 8 8 8 8 8
11 8 11 12 11 11 14 14 12 13 10 10 10 15 13 15 12 13 7 6 8 8 9 8 8 8 10 15 11 9 8 8 8 8 8 8 8 6 6 8 8 8 8 19 25 19 19 12 15 10
10 10 10 10 10 12 13 17 20 13 11 10 13 10 11 10 12 16 15 10 10 10 10 11 11 11 11 8 8 6 6 8 8 8 8 8 10 10 10 12 12 11 11 12 10 10 8 8 8 8
9 9 16 13 11 8 8 8 8 8 8 8 8 8 10 8 11 11 13 10 10 10 10 8 6 6 6 8 8 9 8 8 6 6 8 8 11 11 8 9 8 10 8 8 8 8 8 8 8 11
11 12 11 13 15 21 12 10 10 10 10 10 10 10 8 8 8 10 7 9 12 12 12 9 7 10 6 12 12 12 12 11 11 10 9 9 9 9 15 17 15 11 10 8 8 10 12 10 9 9
9 9 8 10 11 16 11 13 8 8 8 8 11 8 8 8 8 9 9 9 9 11 9 8 8 8 8 10 8 11 7 6 8 8 9 9 13 16 14 13 10 12 10 9 8 8 8 11 8 8
8 8 8 10 8 8 6 6 8 8 11 11 10 8 8 8 10 8 12 19 10 9 9 9 9 10 8 10 8 8 8 11 13 10 8 7 7 | Open.Hide.15 17 15 15 14 13 10 10 6 6 6 6 7 10 10 10 21 8 8 8 9 9 9 9 10 10 8 8 8 8 8 6 6 6 9 8 8 3 0 3 8 10 3 0 3 21 11 11 11 9
9 3 0 0 0 3 6 6 6 6 9 9 9 12 10 8 8 10 12 15 10 10 11 19 27 27 29 32 37 36 36 36 35 29 31 37 37 37 41 39 39 35 35 33 33 28 26 26 28 28
38 37 37 28 33 24 31 24 33 30 33 36 37 47 43 37 30 30 37 24 32 41 41 41 41 36 36 25 28 29 36 36 48 47 48 48 41 41 41 46 36 41 41 41 41 42 42 42 57 57
57 48 48 39 42 42 34 34 34 42 34 40 23 23 12 25 22 30 30 30 36 33 37 39 37 37 37 37 27 24 15 10 10 6 6 8 10 13 25 29 39 30 37 37 37 37 48 48 48 48
57 48 47 43 43 43 43 47 47 43 42 42 35 35 35 39 39 43 43 47 40 36 25 23 28 23 28 28 37 31 32 32 42 32 32 20 20 20 24 24 23 24 15 27 18 27 18 25 28 36
37 32 25 22 28 15 13 13 16 16 11 11 11 24 24 42 43 35 32 24 24 24 24 28 32 32 28 29 31 33 38 38 36 24 15 15 12 12 14 22 22 23 23 23 23 27 27 23 23 18
24 22 30 30 30 35 33 33 32 35 42 35 35 42 30 26 28 28 20 27 28 35 32 44 37 25 25 25 30 32 37 22 16 9 9 9 9 12 14 24 24 32 32 28 37 32 34 18 18 14
14 13 16 13 13 13 18 11 11 25 15 15 18 12 21 17 23 28 32 32 43 43 34 34 23 23 23 23 34 28 19 10 8 8 10 15 10 10 8 8 8 18 18 28 23 28 37 37 39 40
40 43 43 39 39 30 24 24 14 14 24 28 23 15 11 11 11 11 11 11 11 12 10 8 8 8 8 6 6 7 8 10 19 14 9 9 9 9 7 12 8 11 10 10 14 18 11 8 6 6
6 12 12 22 12 11 12 21 12 12 16 11 10 10 12 11 11 11 10 10 9 11 23 15 10 10 8 8 8 8 12 12 12 11 11 11 8 8 6 6 8 6 8 8 8 8 11 9 8 8
10 8 10 15 20 28 23 23 14 13 13 18 12 12 12 10 10 10 10 12 12 10 15 10 8 8 8 9 9 17 15 13 11 11 11 11 13 13 14 10 10 10 8 10 10 14 10 14 14 18
15 15 12 12 12 14 13 14 12 12 9 9 9 10 9 10 10 9 10 13 21 12 11 8 8 8 8 8 8 10 10 10 12 12 11 15 15 19 11 22 24 24 19 10 8 8 8 8 8 8
10 12 12 11 12 10 10 10 10 8 8 8 8 8 8 11 8 8 8 11 16 11 10 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 7 7 9 7 11 8 8 8 8 8 8
10 10 8 8 8 10 12 14 9 12 9 10 10 10 10 10 10 15 10 10 8 9 9 9 10 8 6 6 6 8 10 16 11 11 11 8 8 6 6 8 8 16 8 8 8 8 8 8 8 10
8 8 8 8 10 10 8 8 10 11 7 8 8 8 8 8 15 11 11 10 8 6 6 6 6 13 10 14 10 13 9 8 8 10 10 10 10 8 8 8 8 8 8 10 11 10 10 9 10 10
10 18 12 12 10 10 11 9 9 10 10 10 12 11 9 10 9 11 11 12 12 21 21 25 24 19 11 11 11 11 11 11 |