Query= MSMg01no093_p03.b1 MSMg01no093_p03.b1 CHROMAT_FILE:
MSMg01no093_p03.b1 PHD_FILE: MSMg01no093_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:18 2005
(360 letters)
>mm_chrX_158127352_158128111
Length = 760
Score = 634 bits (328), Expect = 0.0
Identities = 352/360 (97%)
Strand = Plus / Plus
Query: 1 ggtaggcagacgctattgctccttgtctgacatgacactgaccaggagaagctatagcag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 ggtaggcagacgctattgctccttgtctgagatgacactgaccaggagaagctatagcag 260
Query: 61 ggaagaaggaaatcctgctaatggtggttgtgtgggacctgtagctgccatactggttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagaaggaaatcctgctaatggtggttgtgtgggacctgtagctgccatactggttcc 320
Query: 121 agagacctctgtgagattatgccagggacatacagaaacactcatttgggaaaaggaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagacctctgtgagattatgccagggacatacagaaacactcatttgggaaaaggaagg 380
Query: 181 ctattcctaaaagttaataattttaaataagcaactaggatcatgaaactagggagtatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctattcctaaaagttaataattttaaataagcaactaggatcatgaaactagggagtatg 440
Query: 241 gattaattctacctcctttgtatcctcaaagagacatttgagttagaatactttgggctc 300
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattaattcgacctcatttgtatcctcaaagagacatttgagttagaatactttgggctc 500
Query: 301 ttttgctgttaagcgagcttttttttgtttatagcacataaaatgtctccaccttggatt 360
|||||||||||||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct: 501 ttttgctgttaagcgagcaaattattgtttatagcaaataaaatgtctccaccttggatt 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no093_p03.g1 MSMg01no093_p03.g1 CHROMAT_FILE:
MSMg01no093_p03.g1 PHD_FILE: MSMg01no093_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:19 2005
(384 letters)
>mm_chrX_158256810_158257592
Length = 783
Score = 688 bits (356), Expect = 0.0
Identities = 377/384 (98%), Gaps = 1/384 (0%)
Strand = Plus / Minus
Query: 1 ccaggaagcagtattagtcagatcttcactagagaggccactatcaagaaactccaccaa 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 583 ccaggaagcagtattagtcagatcttcactagagagg-gactatcaagaaactccaccaa 525
Query: 61 gtcctacatatactaccgaaagctatgagcagtattacagactcagaaatgtacctggct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 524 gtcctacatatactaccgaaagctatgagcaatattacagactcagaaatgtacctggct 465
Query: 121 cttctacgatgcccttctacagtgacatagaaattcccaatatggacaccatcacttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cttctacgatgcccttctacagtgacatagaaattcccaatatggacaccatcacttctg 405
Query: 181 ccccttcaacatcaagggaagcaagtacactccctccaggggaactcatccccatacgga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 404 ccccttcaacatcaagggaagcaagtacactccctccaggggaactcatccccatacgaa 345
Query: 241 atcctgaaatgacgcgaagggccttcttggaggctctgctcacacctgtgattgatccta 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atcctgaaatgaggcgaagggccttcttggaggctctgctcacacctgtgattgatccta 285
Query: 301 acacttttggtgagttttcaatggcatctttgattaacatcctctaaacaagcttgtaga 360
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 284 acacttttggtgagttttcaatggcatcaatgattaacatcctctaaacaagcttgtaga 225
Query: 361 agcttcttgtttcctatttgatgg 384
||||||||||||||||||||||||
Sbjct: 224 agcttcttgtttcctatttgatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 783
Length adjustment: 9
Effective length of query: 375
Effective length of database: 774
Effective search space: 290250
Effective search space used: 290250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
