Query= MSMg01no102_g21.b1 MSMg01no102_g21.b1 CHROMAT_FILE:
MSMg01no102_g21.b1 PHD_FILE: MSMg01no102_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:01 2005
(489 letters)
>mm_chrX_135873855_135874742
Length = 888
Score = 849 bits (439), Expect = 0.0
Identities = 478/497 (96%), Gaps = 13/497 (2%)
Strand = Plus / Minus
Query: 4 gaattctttttcctttttct---tttc-------tttttcttttttttccgagacagggt 53
|||||||||||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 752 gaattctttttcctttttctttctttctttttttttttttttttttttccgagacagggt 693
Query: 54 ttctctttgtatccctggctgtcctggcactcactttgtagaccaggctggcctcgaact 113
|||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 692 ttctctgtatatccctggctgtcctggaactcactttgtagaccaggctggcctcgaact 633
Query: 114 cagaaatccacctgcctctgcctcccgagtgctgggattaaaggcgtgcgccaccacacc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cagaaatccacctgcctctgcctcccgagtgctgggattaaaggcgtgcgccaccacacc 573
Query: 174 cggccttgctggagaattcttggggaaaacatctaactctattctaggaacttgaggtca 233
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 572 cggccttgctggagaattcttggggaaaacatctaactctattctaggaacctgaggtca 513
Query: 234 agacaccccaggtaacttagcttctagtaagctgcctgcttgagcataaccctctccaga 293
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 512 agacaccccaggtaac--agcttctagtaagctgcctgcttgagcagaaccctctccaga 455
Query: 294 taactgcttatcttagcttttgttagactgctagcttgtgcacaaacctcccactgtagc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 taactgcttatcttagcttttgttagactgctagcttgtgcacaaacctcccactgtagc 395
Query: 354 tatata-tgagatactgaggatatggcttttgccttcaaaagcctcttactctaaatgct 412
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tatataatgagatactgaggatatggcttttgccttcaaaagcctcttactctaaatgct 335
Query: 413 tgtggctacacttgggtccttgaatataaccactactgcctagaattaagacttccaagt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtggctacacttgggtccttgaatataaccactactgcctagaattaagacttccaagt 275
Query: 473 gtctgtaaaccatgtcc 489
|||||||||||||||||
Sbjct: 274 gtctgtaaaccatgtcc 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space: 420562
Effective search space used: 420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_g21.g1 MSMg01no102_g21.g1 CHROMAT_FILE:
MSMg01no102_g21.g1 PHD_FILE: MSMg01no102_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:01 2005
(484 letters)
>mm_chrX_135712779_135713662
Length = 884
Score = 905 bits (468), Expect = 0.0
Identities = 480/484 (99%)
Strand = Plus / Plus
Query: 1 tttatttttgtctaactggaaaagaatgaaacaggaggtcttagtttggttggttcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttttgtctaactggaaaagaatgaaacaggaggtcttagtttggttggttcatcc 260
Query: 61 ttctaatttctgacacagctttcctctttttcgtgtgtgcattaagtagtgtgaactaaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ttctaatttctgacacagctttcctctttttcgtgtgtgcattaggtagtgtgaactaaa 320
Query: 121 tgctttccaggttctgttttaacttttttttccactttcaactgtttgttcttattgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctttccaggttctgttttaacttttttttccactttcaactgtttgttcttattgtaa 380
Query: 181 ttatttcagcatttcaacttttctgtctccccatcttttttgtgtgtgtcttccactgct 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttcagcattttaacttttctgtctccccatcttttttgtgtgtgtcttccactgct 440
Query: 241 gaaatctgatctacacaatgactgggtttaattattttttagatttatattgattttata 300
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gaaatctgagctacacaatgactgggtttaatttttttttagatttatattgattttata 500
Query: 301 tgtgtatatgtgctttagtgcccaaagagagcaggaacacaagatcccctggaactggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtatatgtgctttagtgcccaaagagagcaggaacacaagatcccctggaactggag 560
Query: 361 ttataattggttgttaactgggtgctgggaattgaacctgggccctctggaagagtaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttataattggttgttaactgggtgctgggaattgaacctgggccctctggaagagtaatc 620
Query: 421 agctctcttctgagccatctctccagccccttctaaaattattttataactctggtatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctctcttctgagccatctctccagccccttctaaaattattttataactctggtatat 680
Query: 481 ctcg 484
||||
Sbjct: 681 ctcg 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
