Query= MSMg01no103_c20.b1 MSMg01no103_c20.b1 CHROMAT_FILE:
MSMg01no103_c20.b1 PHD_FILE: MSMg01no103_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:00 2005
(250 letters)
>mm_chrX_10578479_10579130
Length = 652
Score = 453 bits (234), Expect = e-132
Identities = 247/252 (98%), Gaps = 2/252 (0%)
Strand = Plus / Plus
Query: 1 ttgattcctcatttcttgaatttggaaaaaaaaa--gtcaatgattgaaagaaagattat 58
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttgattcctcatttcttgaattttgaaaaaaaaaaagtcaatgattgaaagaaagattat 260
Query: 59 aacattgaatgaggggatatttattggattcaaataggagagagttaagatcctacaaag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacattgaatgaggggatatttattggattcaaataggagagagttaagatcctacaaag 320
Query: 119 gtatcttaaccttaataaattctgaaattatattaaaattgatcaaatatttattttaag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatcttaaccttaataaattctgaaattatattaaaattgatcaaatatttattttaag 380
Query: 179 catactggaaaaggtatatatattctagtacctaaatcacctaaccaaaaatcttcacaa 238
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 catactggaaaaggtatgtatattctggtacctaaatcacctaaccaaaaatcttcacaa 440
Query: 239 atgtacaatcaa 250
||||||||||||
Sbjct: 441 atgtacaatcaa 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 652
Length adjustment: 9
Effective length of query: 241
Effective length of database: 643
Effective search space: 154963
Effective search space used: 154963
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_c20.g1 MSMg01no103_c20.g1 CHROMAT_FILE:
MSMg01no103_c20.g1 PHD_FILE: MSMg01no103_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:01 2005
(172 letters)
>mm_chrX_10759658_10760229
Length = 572
Score = 238 bits (123), Expect = 1e-67
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 1 ttctgggtgtcctgatttgtccagagccccatcttggagagtgctgactgagctgcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttctgggtgtcctgatttgtccagagccccatcttggagagtgctgactgagctgcactg 252
Query: 61 atattcaggcttcacaataccctgtctcctctgcatctccttgagcttagaagtgcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atattcaggcttcacaataccctgtctcctctgcatctccttgagcttagaagtgcctgt 192
Query: 121 gag 123
|||
Sbjct: 191 gag 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
