Query= MSMg01no103_j02.b1 MSMg01no103_j02.b1 CHROMAT_FILE:
MSMg01no103_j02.b1 PHD_FILE: MSMg01no103_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:32 2005
(342 letters)
>mm_chrX_143489181_143489921
Length = 741
Score = 584 bits (302), Expect = e-171
Identities = 329/338 (97%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 tgtggttcctgttaccatgggctaccattcagactggctgtccatattccatttgttggg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgattcctgttaccatgggctaccattcagactggctgtccatattccatttgttggg 260
Query: 61 tttcctacgtgatatgggtgaggaggggtttttaacagaagcacgagtgactcaagggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcctacgtgatatgggtgaggaggggtttttaacagaagcacgagtgactcaagggca 320
Query: 121 ggtgcaaagcccccccgccccttttgcctgcaaggaattttttttaaatgcttcatttct 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ggtgcaaagcccccccgccccttttgcctgcaaggaattttttt-aaatgcttcatttct 379
Query: 181 ctacgacatgccctttgattataggacagaaggtggccgcatttaaagaactaatagatt 240
||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 ctatgacatgctctttgattataggacagaaggtggccgcatttaaagaactagtagatt 439
Query: 241 agtatcacttaaatgtggtcttttgctgcaaaggggagcataaagaagacaaagttcatt 300
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 agtatcacttaaatggggtcttttgctgcaaaggggatcataaagaagacaaagttcatt 499
Query: 301 tcttcatgttccgctcacattcaagagtgaacagatta 338
|||||||||||| |||||||||||||||||| ||||||
Sbjct: 500 tcttcatgttccactcacattcaagagtgaagagatta 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_j02.g1 MSMg01no103_j02.g1 CHROMAT_FILE:
MSMg01no103_j02.g1 PHD_FILE: MSMg01no103_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:32 2005
(504 letters)
>mm_chrX_143621794_143622697
Length = 904
Score = 843 bits (436), Expect = 0.0
Identities = 439/440 (99%)
Strand = Plus / Minus
Query: 1 ataggaagaggttggagaaaatgtcaagtgtgcggagagatgcatacttaggttccagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataggaagaggttggagaaaatgtcaagtgtgcggagagatgcatacttaggttccagga 381
Query: 61 ggaaatgaaatccttagttctctaacagacacgtagaggatacacgactatataagggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaaatgaaatccttagttctctaacagacacgtagaggatacacgactatataagggca 321
Query: 121 aaggaaaatctaaacagagaaagaaacctgggattaaagggcagggatatgttgctgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaggaaaatctaaacagagaaagaaacctgggattaaagggcagggatatgttgctgaga 261
Query: 181 tctttaggaagttcactgaaagtacaaggcaactccacatcttgggaagtggcactatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctttaggaagttcactgaaagtacaaggcaactccacatcttgggaagtggcactatgg 201
Query: 241 cagtgattctcaacctatgggttgccacacctttggcaaacctctatggcaaaaaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagtgattctcaacctatgggttgccacacctttggcaaacctctatggcaaaaaagaaa 141
Query: 301 aataatatttacattatgattcatagtagtagtgaaattacagttgagaagtacgaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 140 aataatatttacattatgattcatagtagtagtgaaattacagttgagaagtaggaatgg 81
Query: 361 aatgattttatagtttggggtcaccacagtttgaggaactgtgttatagagtagcagcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 aatgattttatagtttggggtcaccacagtttgaggaactgtgttatagagtagcagcat 21
Query: 421 taggaagtttgagacctgct 440
||||||||||||||||||||
Sbjct: 20 taggaagtttgagacctgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
