NGTTTCTGGGGTCTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTCCCACTATCGTGTGAGGTACAATGTGTGCTT
TGAGCTTTACTAAAGTGTCTTTAATGAATGTGGCTGCCCTTGCATTTGGA
GCATATATATTCAGAACTGAGAGTTCCTCTTAGAGGATTTTACCTGTGAT
GACTATGAAGTGTCCCTTCTTGTCTTTTTTATAACTTTGGGTTGGAAGTC
GATTTTATTAGATATTAGAATGGCTACTCCAGCTTGTTTCTTCAGACCAT
TTGCTTGGAAAATTGTTTTCCAGCCTTTTACTGTGAGGTAGTGTCTGTCT
TTTTTCCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTT
GTGTAGCCAGTCTGTTAGCCTATGTCTTTTTATTGGGGAATTGAGTTCAG
TGATATTAAGAGATATTAAGGAAAAGTAAGTATTGCTTCCTTTGATTTTT
GTTGTTAGAGTTGGCATTCTGTTCTTGTGGCTGTCTTCCTTTTGGTTTGT
TGAGGGATTACTTTCTTGCTTTTTCTAGGGCGTGATTTCCGTCCTTGTAT
TGGTTTTTTTCTGTTATTATCCTTTGAAGGGCTGGATTCGTGGAAAGATA
ATGTGTGAGTTTGGTTTTGTTGCGGAATACTTTGGTTTCTCCATCTATGT

TGATTCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAGACTGGCACTTACT
TTCAATATTAATATCCAATTTCTGACGATTTAACCACAAGATTATTTGAC
TATAACATTACATTTTGACATCAAAATAGTGGAAAGTAAGATGAAAATAT
TCATTATTGAATTTGAAATTTGAGTAAAAACTTATAATAAACTTTAGTCA
ATTCACTATTGTTCTTTGTAATATTTTATTATATTTAAAAAATCTTCCTT
GAATTAATGAAATCATTTAATATAACTATAGATATATCCTTATTATACAC
TTTAGTAAAAATAGTGCTTATTGTAAATCTTTAGCACATAATGTGTCATT
ATTATTATTGTTGTGGTTATATTAGTTTATAGTTATTTTATTTTTATCAT
CTCATTAATTGACCTTTTAAATATAGCTAATACTTTAGTTTTGCAAATTA
AACTATTAAATCTCTGAAGCTTCAATAAATACTCAAAATGGCACAGTAAA
GCCTGATATATAAGCAGTCTTTAATTCCTGTGGTACATTTAGCTTTTTGG
AAGGAAATGAGAAATGAAGTGAGGAAAAATAGTAAGTTTAAGGAATAGTA
TTTTTTACAGATTTTTATAGGTGAAATATTAGCCACAAATATCATG

Query= MSMg01no105_d01.g1 MSMg01no105_d01.g1 CHROMAT_FILE:
MSMg01no105_d01.g1 PHD_FILE: MSMg01no105_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:44 2005
         (529 letters)



>mm_chrX_77968017_77968945
          Length = 929

 Score =  971 bits (502), Expect = 0.0
 Identities = 523/530 (98%), Gaps = 1/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagaagactggcacttactttc-aatattaatatccaatttctgacgatttaaccacaa 59
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| 
Sbjct: 200 tcagaagactggcacttactttcaaatattaatatccaatttctgatgatttaaccacag 259

                                                                       
Query: 60  gattatttgactataacattacattttgacatcaaaatagtggaaagtaagatgaaaata 119
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 gattatttgactataacattacattttcacatcaaaatagtggaaagtaagatgaaaata 319

                                                                       
Query: 120 ttcattattgaatttgaaatttgagtaaaaacttataataaactttagtcaattcactat 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 ttcattattgaatttgaaatttgagtaaaaacttataataaactttagtcaattcattat 379

                                                                       
Query: 180 tgttctttgtaatattttattatatttaaaaaatcttccttgaattaatgaaatcattta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgttctttgtaatattttattatatttaaaaaatcttccttgaattaatgaaatcattta 439

                                                                       
Query: 240 atataactatagatatatccttattatacactttagtaaaaatagtgcttattgtaaatc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atataactatagatatatccttattatacactttagtaaaaatagtgcttattgtaaatc 499

                                                                       
Query: 300 tttagcacataatgtgtcattattattattgttgtggttatattagtttatagttatttt 359
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttagcatataatgtgtcattattattattgttgtggttatattagtttatagttatttt 559

                                                                       
Query: 360 atttttatcatctcattaattgaccttttaaatatagctaatactttagttttgcaaatt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttttatcatctcattaattgaccttttaaatatagctaatactttagttttgcaaatt 619

                                                                       
Query: 420 aaactattaaatctctgaagcttcaataaatactcaaaatggcacagtaaagcctgatat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaactattaaatctctgaagcttcaataaatactcaaaatggcacagtaaagcctgatat 679

                                                             
Query: 480 ataagcagtctttaattcctgtggtacatttagctttttggaaggaaatg 529
           ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 ataagcagtctttaattcctgtggtacatttagttttttggaaggaaatg 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)