Query= MSMg01no107_j21.b1 MSMg01no107_j21.b1 CHROMAT_FILE:
MSMg01no107_j21.b1 PHD_FILE: MSMg01no107_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:45 2005
(640 letters)
>mm_chrX_137971294_137972333
Length = 1040
Score = 1208 bits (625), Expect = 0.0
Identities = 637/641 (99%), Gaps = 1/641 (0%)
Strand = Plus / Minus
Query: 1 gagccagaaaagtatcattctctactataaaaacccttagagactgggaagatagtaagg 60
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 650 gagccagaaaagtatcattctctactataaaaacacatagagactgggaagatagtaagg 591
Query: 61 gacattctaatccccaaaacatacactactatagagctggaatgcttaggacaaaacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gacattctaatccccaaaacatacactactatagagctggaatgcttaggacaaaacaac 531
Query: 121 ccaagaggaattagaataacatatgcaaacaacacagcatttatgcacaacaaacctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ccaagaggaattagaataacatatgcaaacaacacagcatttatgcacaacaaacctgaa 471
Query: 181 cacattttgtcaaactggcttctgaaagttttgtacaaggaaaatataaaactctgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cacattttgtcaaactggcttctgaaagttttgtacaaggaaaatataaaactctgttaa 411
Query: 241 tcattgtttcatctttagcacctgtagtttaccatgtaagctagcctcctatcttgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcattgtttcatctttagcacctgtagtttaccatgtaagctagcctcctatcttgtctt 351
Query: 301 cctctagttattactggagaatctccctaaatattatttaacttcagctcaaactagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cctctagttattactggagaatctccctaaatattatttaacttcagctcaaactagatg 291
Query: 361 ccaccatcttgttgaaacctgttttcctggttataaaggagtgtgttccagtaaaagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccaccatcttgttgaaacctgttttcctggttataaaggagtgtgttccagtaaaagcac 231
Query: 421 aatctgacacttcagcttaaagtctgttattgtgttggatatggtttttt-atatacttg 479
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 230 aatctgacacttcagcttaaagtctgttattgtgttggatatgttttttttatatacttg 171
Query: 480 acacatgctagagtcatttggaaaggaagactcagttgagaaaatgacccctgtggggca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acacatgctagagtcatttggaaaggaagactcagttgagaaaatgacccctgtggggca 111
Query: 540 ttctcccccaaagtgatttatttgggagggcccagcccactgtgagaaatgtcatgtctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttctcccccaaagtgatttatttgggagggcccagcccactgtgagaaatgtcatgtctg 51
Query: 600 ggcaggtagtcatgagttgtataagaaagcaagctgagcaa 640
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ggcaggtagtcatgagttgtataagaaagcaagctgagcaa 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_j21.g1 MSMg01no107_j21.g1 CHROMAT_FILE:
MSMg01no107_j21.g1 PHD_FILE: MSMg01no107_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:45 2005
(706 letters)
>mm_chrX_137884625_137885729
Length = 1105
Score = 1301 bits (673), Expect = 0.0
Identities = 694/701 (99%), Gaps = 1/701 (0%)
Strand = Plus / Plus
Query: 6 agtggagcccatggaatgctttcaacctcttgtagacagggctttacaacagggaagcca 65
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 206 agtggagcccatggaatgctttcaacctcttgtagagagggctttacaacagggaagcca 265
Query: 66 gaagaaaccatgatccatagccattcagttgatgaccctccataattttggacttccgta 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaagaaaccatgatccatagccattcagttgatgaccctccataattttggacttccgta 325
Query: 126 atcttgaatgacctgttgatgtaacattaattgaacacttattctgagcaaaagcatttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atcttgaatgacctgttgatgtaacattaattgaacacttattctgagcaaaagcatttt 385
Query: 186 attttgtgtgttggtaagaacacagtaaaacagttcagggactcgaagaagtgttcagta 245
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 386 attttgtgtgttggtaagaacacagtaaaacagttcagagactcgaagaagtgttcagta 445
Query: 246 aggagaaagggattcagatatttagagtagatgctaccttagagttcttaagaaaaatat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aggagaaagggattcagatatttagagtagatgctaccttagagttcttaagaaaaatat 505
Query: 306 tgacttttagtttaaagaaactaaatttcctgtttttccatagagttttaaaaattaaac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgacttttagtttaaagaaactaaatttcctgtttttccatagagttttaaaaattaaac 565
Query: 366 gtgaaagaattgagagatatcatggttagaagataatccaaattctgtatgcaccaaaat 425
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 566 atgaaagaattgagagatatcatggttagaagataatccacattctgtatgcaccaaaat 625
Query: 426 tctttcagaaaggatttatgttgtaattttaaaataattgtgccatctcagaatgtttgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tctttcagaaaggatttatgttgtaattttaaaataattgtgccatctcagaatgtttgc 685
Query: 486 ctgtaagtgtgtcattcatatatcctctcagtatatgcatctttaataatatagtgtcac 545
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctataagtgtgtcattcatatatcctctcagtatatgcatctttaataatatagtgtcac 745
Query: 546 tcttttatggtgaactgggctttaacttgcactagatagcaaatatctaattatttataa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tcttttatggtgaactgggctttaacttgcactagatagcaaatatctaattatttataa 805
Query: 606 cagtctagttcctatttctgcgttaccaagtgacactggtacaaaaaactcaatgttcat 665
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 806 cagtctagttcctatttctgtgttaccaagtgacactggtacaaaaaactcaatgttcat 865
Query: 666 cttgtatgaatgacaaatgagttgacttttttaaagcttaa 706
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 866 cttgtatgaatgacaaatgagttgacttttt-aaagcttaa 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1105
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1095
Effective search space: 762120
Effective search space used: 762120
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
