Query= MSMg01no112_j22.b1 MSMg01no112_j22.b1 CHROMAT_FILE:
MSMg01no112_j22.b1 PHD_FILE: MSMg01no112_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:49 2005
(581 letters)
>mm_chrX_141354520_141355500
Length = 981
Score = 750 bits (388), Expect = 0.0
Identities = 398/402 (99%), Gaps = 2/402 (0%)
Strand = Plus / Minus
Query: 5 gaattctccatcatttccaaaagccacattatcagcagatttaagaaggaactgtagtaa 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaattctccatcattactaaaagccacattatcagcagatttaagaaggaactgtagtaa 341
Query: 65 gtataaggcaaagagaaaaagagaaattaccacaacagttgtcagacagttgtcattggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtataaggcaaagagaaaaagagaaattaccacaacagttgtcagacagttgtcattggc 281
Query: 125 tgaaatcagatttgtgaattacagcactagaccagcagaacaattagaggacacagcgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgaaatcagatttgtgaattacagcactagaccagcagaacaattagaggacacagcgtt 221
Query: 185 tacaaagcttatggcattttaaaacttttttattgaatttttgtgaatttcacacgatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tacaaagcttatggcattttaaaacttttttattgaatttttgtgaatttcacacgatgc 161
Query: 245 accccaattccattcatttcctcctcctgtcttacctgcattctacccttgcaacctcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 accccaattccattcatttcctcctcctgtcttacctgcattctacccttgcaacctcct 101
Query: 305 ccaccccaacagagaaaaaaaaaaaaacatcgtacaagctgcagtgtgtcactgtgtgtt 364
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccaccccaacagag--aaaaaaaaaaacatcgtacaagctgcagtgtgtcactgtgtgtt 43
Query: 365 ccacagtgtacctttttttctacacttcttaacttgcagtga 406
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ccacagtgtacctttttttctacacttcttaacttgcagtga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_j22.g1 MSMg01no112_j22.g1 CHROMAT_FILE:
MSMg01no112_j22.g1 PHD_FILE: MSMg01no112_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:49 2005
(654 letters)
>mm_chrX_141240579_141241632
Length = 1054
Score = 1243 bits (643), Expect = 0.0
Identities = 652/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 1 cgtctgcatgtcatatttacctatcacaacatcaaacttgcagtttcctgtgtgtgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtctgcatgtcatatttacctatcacaacatcaaacttgcagtttcctgtgtgtgggga 260
Query: 61 ctatcataaattctttaactcttttgtatcctataaaaagaaagaaaaattagaacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatcataaattctttaactcttttgtatcctataaaaagaaagaaaaattagaacaaaa 320
Query: 121 caagatgggaataatcagtggttcagcaaattcttttagtgacatttgggcaaatttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagatgggaataatcagtggttcagcaaattcttttagtgacatttgggcaaatttccc 380
Query: 181 ccgtagataaatgcatctatattccatttccttaccttgtttccttttcctgatggaaac 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttagataaatgcatctatattccatttccttaccttgtttccttttcctgatggaaac 440
Query: 241 taagcaatctggcctgaaattcaagggcttctactaattttatttttcattttttcttgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagcaatctggcctgaaattcaagggcttctactaattttatttttcattttttcttgt 500
Query: 301 attgtcaatctcatatctatgagactgaaattctccaatcagagggcttatatttcttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgtcaatctcatatctatgagactgaaattctccaatcagagggcttatatttcttgt 560
Query: 361 ttattaacttcctgctatgcccactactattgcttttgatgtttttgacaactttctttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattaacttcctgctatgcccactactattgcttttgatgtttttgacaactttctttt 620
Query: 421 taaaaaa-ttaatcattttattcacttacatttcaaatgatatcccccttcctggttacc 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaaaaattaatcattttattcacttacatttcaaatgatatcccccttcctggttacc 680
Query: 480 cctccacgactcccctcatctcacttcaccttccccccctctactttgcctctatgaggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctccacgactcccctcatctcacttcaccttccccccctctactttgcctctatgaggg 740
Query: 540 tactcttctacccattcacccactcctacctcacccttccagcatcccccctcccattta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tactcttctacccattcacccactcctacctcacccttccagcatcccccctcccattta 800
Query: 600 tgtcagataaggctgatatatatatctggagacctggctccctccatgtatactc 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtcagataaggctgatatatatatctggagacctggctccctccatgtatactc 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
