XXXXXXXXXXXXXXXXXXXXXXXXTTCAAGACAACCGCGGAATTCCAGGG
TTTACGGAAAGCACCAGCTTCTGAGTTCACTGCTGCTCAGCCTGAGGTGG
CCGACTGGTCTGAGGGTGTGCAGGTTCCCTCTGTGCTCATCCAGCAGTTC
CCCACGGAAGACTGGAGTGCACAGCCAGCCACTGAGGATTGGACAGCAGC
TCCCCCAGTGTAGGCCACTGAGACACCTGAGCAAAGGGAAACAAGATGGA
AGGAAAATAAAGTTCCTAAAAGCTGAAAAAAAAGGAAAGAAAAATTGAAA
TATATATATATTTATATATATGTTTGTGTTGATACTTATTCAGGATTCGT
TTTTGCTTTTATACATACAGGAGAGAAGCCTCTAGAAATATAATTGATCA
TTGTTTATGAGCCTTTAATTCTATGGGATTACCTAAAGTCATTAAGACAG
ATAATGGGCCAGCCTATACTGGCAAAAATTTTAAATCATTTGGTAAGGAA
TTTGGTATTGAACCTAAATCTGGAANTCCTTTTTTTTTTTTTTTTTTTTT
TTGAATTTTGAGACAGGGTTTCCCCGTGTAGCCCTGGCTGTCCTGGAACT
CACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGC
CTCCCAAGTGCAGGGATTAAAGGCATAAGACACCACGCCCGGCCCAAAAC
CTGGAATTCCTTATAACCCAATGGGN

ATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGAAAAACCAAGGATAAGAAACTCTA
TTTTTAAGGTAGAACTTTGCTGTCTGGTATCCTTTCTAGAGATGGAACAA
TGTGGGTCTAGGAAAGTGAGTGGAGGTCAGTAAATCAGGTTAGAGAAGAC
TGACTAGAAAGAAAAAGCCTTCAGGGATTGTGATTTTATACATGCTCTGG
TGCCATGCCAAGGACAAAGTACCTGCATAGTACCCTCATATTACCTGGCT
TGTTGTGCTAAGTGTGCCTCCTCTGACTCATTGGAAAGTTATACCCCCAC
TCTATATATACTAGTCCATGTTGTCCTCTACATATATGCCTATAATAAAG
AATAAGTGAGAGTACATATTGGCCTTGATACAATGTTATCAAAGGTCAAA
GAGTCATAATTCTGGTCTCAAAAAGTAGGGACAGGAATAGCCAATGTAAT
TGCCATAAGTATCTAAATTTTTATTAATGGGGATGATTCCAAGCTTTATG
ACTTACTTTGAAGGAACAAAATGCTGAATATATTTTAAACTTCATTTTAG
GTATGGCTCTATACAGTTTTATCAACAAAGGGGCTACAAGAGGCAGGGCC
CCTATTGGGTGGCTATGCAGGGCTTTGCACCTACACACAGAGGCCCCTTA
TGTCCTGTGCAGAGAACATAGGGGTTTTTGGAGGGTGGGGACCAT

Query= MSMg01no114_j16.g1 MSMg01no114_j16.g1 CHROMAT_FILE:
MSMg01no114_j16.g1 PHD_FILE: MSMg01no114_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:19 2005
         (636 letters)



>mm_chrX_43784370_43785403
          Length = 1034

 Score = 1178 bits (609), Expect = 0.0
 Identities = 628/635 (98%), Gaps = 2/635 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaaaaaccaaggataagaaactctatttttaaggtagaactttgctgtctggtatccttt 61
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaaaaaccaaggataagaaact--atttttaaggtagaactttgctgtctggtatccttt 259

                                                                       
Query: 62  ctagagatggaacaatgtgggtctaggaaagtgagtggaggtcagtaaatcaggttagag 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctagagatggaacaatgtgggtctaggaaagtgagtggaggtcagtaaatcaggttagag 319

                                                                       
Query: 122 aagactgactagaaagaaaaagccttcagggattgtgattttatacatgctctggtgcca 181
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 320 aagactgactagaaagaaaaagccttcaggaattgtgattttatacatgctctggtgcca 379

                                                                       
Query: 182 tgccaaggacaaagtacctgcatagtaccctcatattacctggcttgttgtgctaagtgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgccaaggacaaagtacctgcatagtaccctcatattacctggcttgttgtgctaagtgt 439

                                                                       
Query: 242 gcctcctctgactcattggaaagttatacccccactctatatatactagtccatgttgtc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcctcctctgactcattggaaagttatacccccactctatatatactagtccatgttgtc 499

                                                                       
Query: 302 ctctacatatatgcctataataaagaataagtgagagtacatattggccttgatacaatg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctacatatatgcctataataaagaataagtgagagtacatattggccttgatacaatg 559

                                                                       
Query: 362 ttatcaaaggtcaaagagtcataattctggtctcaaaaagtagggacaggaatagccaat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttatcaaaggtcaaagagtcataattctggtctcaaaaagtagggacaggaatagccaat 619

                                                                       
Query: 422 gtaattgccataagtatctaaatttttattaatggggatgattccaagctttatgactta 481
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtaattgccagaagtacctaaatttttattaatggggatgattccaagctttatgactta 679

                                                                       
Query: 482 ctttgaaggaacaaaatgctgaatatattttaaacttcattttaggtatggctctataca 541
           |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 680 ctttgaaggaacaaaatgctgaatatattttaaatttcattttagatatggctctataca 739

                                                                       
Query: 542 gttttatcaacaaaggggctacaagaggcagggcccctattgggtggctatgcagggctt 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttttatcaacaaaggggctacaagaggcagggcccctattgggtggctatgcagggctt 799

                                              
Query: 602 tgcacctacacacagaggccccttatgtcctgtgc 636
           |||||||||||||||||||||||||||||||||||
Sbjct: 800 tgcacctacacacagaggccccttatgtcctgtgc 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1034
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1024
Effective search space:   641024
Effective search space used:   641024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)