Query= MSMg01no117_f15.b1 MSMg01no117_f15.b1 CHROMAT_FILE:
MSMg01no117_f15.b1 PHD_FILE: MSMg01no117_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:53 2005
(644 letters)
>mm_chrX_84691351_84692393
Length = 1043
Score = 1191 bits (616), Expect = 0.0
Identities = 637/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 1 gataaaatgtcaccattatttatttccatcatttaagatacttgttttgtgtaaaacaga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 gataaaatgtcaccattatttatttccatcatttatgatacttgttttgtgtaaaacaga 260
Query: 61 aagatgtaaatagataaacttagccacttaacacacagcctgtaaaatagaaacctgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatgtaaatagataaacttagccacttaacacacagcctgtaaaatagaaacctgatt 320
Query: 121 tactaacatttcttaccagttttatttctctggactctaatactgcagtattttttcagg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactaacatttcttaccagttatatttctctggactctaatactgcagtattttttcagg 380
Query: 181 caaaatttgccagacattatttctggttatatggttgtatatttgaatacatatacattt 240
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 381 caaaatttgccagacattatttccggttatatggttgtatatt-gaatacatatacattt 439
Query: 241 caggaacatattgtgctttctcttctaggataagacagggaaggaaatgcatatgctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caggaacatattgtgctttctcttctaggataagacagggaaggaaatgcatatgctttt 499
Query: 301 ctcattttcccaaagtatttcaataaacctttcagattttacatcttagaaaatgtaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctcattttcccaaagtatttcaataaacctttcagattttacatcttagaaaatgtaact 559
Query: 361 ctttgcctcttgtgaagtttttactttcatatttcatttaattaataacttgtgcaagga 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 ctttgcctcttgtgaagtttttactttaatatttcatttaattaataacttgtgcaagga 619
Query: 421 ataattaaccaatatgaccacataatatataaataagttatgtttagttaacaaatcatt 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 ataattaaccaatatgaccacataatatttaaataagttatgtttagttaacaaatcatt 679
Query: 481 cactatctgtgagctctctttaatgtaaaataggagaaagtatccataaaacggattttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cactatctgtgagctctctttaatgtaaaataggagaaagtatccataaaacggattttt 739
Query: 541 tcaattttgaatgatatcaatcaagaaaaatgcctatttttcagggtttcataaaagtta 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcaattttgaatgatattaatcaagaaaaatgcctatttttcagggtttcataaaagtta 799
Query: 601 ctgtcataagtaacaagaacattaaaataccactactattatca 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctgtcataagtaacaagaacattaaaataccactactattatca 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1043
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1033
Effective search space: 654922
Effective search space used: 654922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_f15.g1 MSMg01no117_f15.g1 CHROMAT_FILE:
MSMg01no117_f15.g1 PHD_FILE: MSMg01no117_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:53 2005
(588 letters)
>mm_chrX_84811902_84812889
Length = 988
Score = 1006 bits (520), Expect = 0.0
Identities = 572/590 (96%), Gaps = 4/590 (0%)
Strand = Plus / Minus
Query: 1 agactgtctggcttttcacatcattgaaaatcttattcatctttctctatccctgcatta 60
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agactgcctggctttacacatcattgaaaatcttattcatctttctctatccctgcatta 729
Query: 61 ctgaatctggtattcattctataattttcagtattctggtttttactttctatatcattg 120
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 728 ctgaatctggtattcattctatagttttcagtattctggtttttactatctatatcattg 669
Query: 121 acatagagtttagcgtactctttgccttctagattttttgaaaatcagttcaagaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 668 acatagagtttagcgtactctttgccttctagattttttgaaaatcagtacaagaacatt 609
Query: 181 gatccaggttcaagttatttgcaaattactacaaatttctttttgttttttattaatgta 240
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 608 gatccaggttcaagttatttttaaattactacaaatttctttttg-tttttattaatgta 550
Query: 241 attcattatttatttctcaaaaacacactatactaagcctacttgcataacagcatatgc 300
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 549 attcattacttatttctcaaaaacacactatactaagcctacttacataacagcatatgc 490
Query: 301 tacttatgaaaattttcataaaattttagataaatgatgtaaatactttcacagaaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacttatgaaaattttcataaaattttagataaatgatgtaaatactttcacagaaagca 430
Query: 361 gtaaacaactggattagtatattaaagacgagggttttaacttcgttttaaactaagaca 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 429 ataaacaactggattagtatattaaagacaagggttttaacttcgttttaaactaagaca 370
Query: 421 cttggtttccaggtgatactctcctattaatttgtaagttttgcatggccaaaaggaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cttggtttccaggtgatactctcctattaatttgtaagttttgcatggccaaaaggaaga 310
Query: 481 cattagcagacaattttctttactgtgt--ttgagtttgagtaacagtgatttacataaa 538
|||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 309 cattagcagaaaattttctttactgtgtaatggagtttgagtaacagtgatttacataaa 250
Query: 539 tatacatagttaaatcgactatgcactattaccaagtaattcatatggct 588
|||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 249 tatacatagttaaatcgactatgcactattaccaagtagt-catatggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
