Query= MSMg01no117_m13.b1 MSMg01no117_m13.b1 CHROMAT_FILE:
MSMg01no117_m13.b1 PHD_FILE: MSMg01no117_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:26 2005
(204 letters)
>mm_chrX_154239488_154240091
Length = 604
Score = 385 bits (199), Expect = e-111
Identities = 202/203 (99%)
Strand = Plus / Plus
Query: 1 tgtggcaacccttcttcttgtgcctccggagtgctgggattattggtaccaagttacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtggcaacccttcttcttgtgcctccggagtgctgggattattggtaccaagttacata 260
Query: 61 caagtacagattgcacttgtgcagactctttcaccacttctcatttcccttttgtcacca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagtacagattgcacttgtgcggactctttcaccacttctcatttcccttttgtcacca 320
Query: 121 ctttcactcctaggagttccctttgtgtccctctaagtttcacttttgctttcatgctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcactcctaggagttccctttgtgtccctctaagtttcacttttgctttcatgctat 380
Query: 181 attatgtatctatatagcatcta 203
|||||||||||||||||||||||
Sbjct: 381 attatgtatctatatagcatcta 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no117_m13.g1 MSMg01no117_m13.g1 CHROMAT_FILE:
MSMg01no117_m13.g1 PHD_FILE: MSMg01no117_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:27 2005
(245 letters)
>mm_chrX_154391840_154392484
Length = 645
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 aaagtgatacaagtacagaatgaccaagaatacatgctaaacaaacgtagatggagggga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 aaagtgatacaagtacagaatgaccaagaatacatgctgaacaaacgtagatggagggga 497
Query: 61 aaacatttgaaatgtaaataaagaaaatatacaatttaataaag-aaaaaaacagtgaga 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 496 aaacatttgaaatgtaaataaagaaaatatacaatttaataaagaaaaaaaacagtgaga 437
Query: 120 ccatgcaacccactgcagataattaatgtactatatactggagttatcatttactaaact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ccatgcaacccactgcagataattaatgtactatatactggagttatcatttactaaact 377
Query: 180 taattagtgttacatttcttcaaatcagtaagcctgaagtttccctcaaggatggcttgc 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 376 taattagtgttacatttcttcaaatcagtaagtctgaagtttccctcaaggatggcttgc 317
Query: 240 cctta 244
|||||
Sbjct: 316 cctta 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
