NNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCCTCTTGGGTTCTTTATATATATTGGATATTAGCCC
TCTATCTGATTTAAGATAGGTAAAGATCCTTTCACAATCTGTTGGTGGCC
TTTTTGTCTTATTGACAGTGTCTTTTGCCTTACACAAGCTTTTCAGTTTC
ATGAGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGT
TCTATTCAGGAATTTTTCCCCTTTGCCCATATCTTCGAGGCTTTTCCCCA
CTTACTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTT
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATTGATTCC
CATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAA
TGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAG
TGACCATAGGTGTGTGGGTTCATTTATGGGTCTTCAATTCTATTCCATTG
GTATACTTGCCTGTCACTATACCAGTACCATGCAGTTTTAATCACAATTG
CTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTC

NTTTCGATGAAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTTTCTTCAATAATTTTTTCA
TATTTGAAGAATGCTAAATTTCAATGTTTTCATATAGGTGTTTAAAAAAT
GATATAGCAATGATGATAATACCCCTTTACCTTATTCCTGAATCTGTTTT
TGAAAATAGAAAAATAAAACAAGATTGATGCTTGCACAATTCCACAGAAC
AGTAGGTAAGATTATCTTGAAATGGTGGAGTGATAGGAAGGTTGAATTTT
TGAAGTTCATAAGATCAAACCCAGTACATGTTTCACACCTATTAAAAACA
AATATATGTTTTCCTGTTTGTGGTTTCTAGATTATTATCAGGATGCATAA
AGTCATGTTTGTATATATGATATCAAAGCCAAACTGTCAGAGGACCAAAG
AAGCCAGACAAAAGGAGGAAAAGCATAGGGATGGTGGGAAATGTAGCCAT
GCAAATATACAATGTACACTGATGAGAAAAGTTTTATTTTATTTTTTATT
AGGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGACCCCTTAC
CCTCCCTCCGCTCCCCTACTCACCCACTCCCACTTCTTGGCCCTGGTATT
CCCTTGTACTGAGGCATATAAAGTTTGCACGAACAATGGGCCTCTCTTTC

Query= MSMg01no118_n22.g1 MSMg01no118_n22.g1 CHROMAT_FILE:
MSMg01no118_n22.g1 PHD_FILE: MSMg01no118_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:51 2005
         (604 letters)



>mm_chrX_153114453_153115456
          Length = 1004

 Score = 1129 bits (584), Expect = 0.0
 Identities = 599/604 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttttcttcaataattttttcatatttgaagaatgctaaatttcaatgttttcatatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttttcttcaataattttttcatatttgaagaatgctaaatttcaatgttttcatatag 260

                                                                       
Query: 61  gtgtttaaaaaatgatatagcaatgatgataatacccctttaccttattcctgaatctgt 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gtgtttaaaaaatgatatagcaatgatgatactacccctttaccttattcctgaatctgt 320

                                                                       
Query: 121 ttttgaaaatagaaaaataaaacaagattgatgcttgcacaattccacagaacagtaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgaaaatagaaaaataaaacaagattgatgcttgcacaattccacagaacagtaggt 380

                                                                       
Query: 181 aagattatcttgaaatggtggagtgataggaaggttgaatttttgaagttcataagatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagattatcttgaaatggtggagtgataggaaggttgaatttttgaagttcataagatca 440

                                                                       
Query: 241 aacccagtacatgtttcacacctattaaaaacaaatatatgttttcctgtttgtggtttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacccagtacatgtttcacacctattaaaaacaaatatatgttttcctgtttgtggtttc 500

                                                                       
Query: 301 tagattattatcaggatgcataaagtcatgtttgtatatatgatatcaaagccaaactgt 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tagattattatcaggatgcataaagtcatgtttgtatatatgatatgaaagccaaactgt 560

                                                                       
Query: 361 cagaggaccaaagaagccagacaaaaggaggaaaagcatagggatggtgggaaatgtagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaggaccaaagaagccagacaaaaggaggaaaagcatagggatggtgggaaatgtagc 620

                                                                       
Query: 421 catgcaaatatacaatgtacactgatgagaaaagttttattttattttttattaggtatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catgcaaatatacaatgtacactgatgagaaaagttttattttattttttattaggtatt 680

                                                                       
Query: 481 ttcttcatttacatttccaatgctatcccaaaagaccccttaccctccctccgctcccct 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 681 ttcttcatttacatttccaatgctatcccaaaagaccccttaccctccctctactcccct 740

                                                                       
Query: 541 actcacccactcccacttcttggccctggtattcccttgtactgaggcatataaagtttg 600
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actcacccactcccatttcttggccctggtattcccttgtactgaggcatataaagtttg 800

               
Query: 601 cacg 604
           ||||
Sbjct: 801 cacg 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)