ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCG
GAATTCTTTATATCCCCAAGGGATCTAGCACCTTTGAAGTCTACCAAATT
TTCATATCTGTTGAGGCATGTCTAGGCCTTTCACTATATGCTCAACAGTC
TATCCAGCAGTCATCATCTTCCCAAAAGATTCTGGGAACATCAGAGTGTG
CCAAGTGTATTCATTAACATTTTTCTTTCGTCTCAGGTTCTTTGGGAATG
TATTCATGTGTCCTATGGATGACAGGAACATTGCTACAAGTCCCAAAGCC
TATTGGACATTCCTCACCAATACAAGCATGTCAATCCCCTCCACCATCTA
TGAAAAGAAACTGTGACAACTTGTATTCACAAGCAACTCTTGTAGCATAA
ATCTCTCCATTGTTCTCACCATCTACTCAGGTGAATGGACAAGCTTACCT
CAATCAAGAATCTACTTTGGGACAGCCCATAGCTGCCCAGGGAGTTCAAC
AACTTTTGTTGTCCAGCCCAGGTTATAAAGAAAGTGACAAGCAGGAAATA
GGAATTTTTCCATCTTACCAAGTACTTCTGGGAATTTCCTTACCTGCAGA
GGGAATGGTAGGATCATGACCATCTGTACAAAGGGTTCTGGGAACTTCCC
TATCTGTCCAAGAGTCTCTGTTCACACCCAAACAAGAACCTGTAGGTACT
CTGCATCTCT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTCTCGCACCTGCGTACAAGGCTTG
TTTACTAGTTAGGCACTGTGGAGGCCCGCACCATCTTATAATGGTGATTG
CTCACGGCACACATGGCTCTTCTCAGAGATTACTGGCGGCACGCACGTAA
TTGCTTGCAGCACGTACCGGCTCTCCACAATTCACCACGATATCTGCAGT
CCCTTCTATGAATAGTCTGTTGTAACCTGGAGAATTCTGGTCATCCACTC
TGATACCACTACTGTTGTAGCAACTTGAACTTCTCTTAAACCAGTCAGTC
CCTTTCTATAGAGATGATTCATCCCTGAAGCATCTACATGGGAGAGAGAA
TGGGGAGCATAGAAATCAGAGAGAGGCAGAAGTAATCTAGACTTCAAGTT
GAGAAAAGAAAAAGTGGTCCTGGGGAAAATACAGTGATTTCTGGGTAGAG
AATATGGAGCATCCCAGTAAAGGTAGTTCTGAACTGGCTTGTTTATCCTG
AAGGCAGACTCGGGCATTGTACAAAGCTCTCTTGAAAGATCTCATACACA
AAACTTTGCTCAACGTCTGACTCATATGTAACATTTCAGCAGTATCTAGG
ATTCATGCTGGAAAACACCGGAGAAAAGAAATCAGGATTTTTGCGCCCCA
AGGTC

Query= MSMg01no119_b18.b1 MSMg01no119_b18.b1 CHROMAT_FILE:
MSMg01no119_b18.b1 PHD_FILE: MSMg01no119_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:09 2005
         (664 letters)



>mm_chrX_143699220_143700283
          Length = 1064

 Score =  369 bits (191), Expect = e-106
 Identities = 537/673 (79%), Gaps = 60/673 (8%)
 Strand = Plus / Plus

                                                                       
Query: 21  caagggatctagcacctttg--aagtctaccaaa-ttttcatatctgttgaggcatgtct 77
           ||||||||||| ||| ||||  |  ||||||||| ||||| |||||||| |||||  |||
Sbjct: 195 caagggatctatcacatttgcta--tctaccaaacttttcgtatctgttcaggcaactct 252

                                                                       
Query: 78  aggcct---ttcactatatgctcaacagtctatccagcagtcatcatcttccc-aaaaga 133
            || ||   |||| || |  ||||||||||||||||||||||||||||||||  ||||||
Sbjct: 253 gggtctgtcttca-taca--ctcaacagtctatccagcagtcatcatcttcctgaaaaga 309

                                                                       
Query: 134 ttctgggaacatc-agagtgtgccaagtgtattcattaacatttttctttcgtctcaggt 192
           ||||||||||||| | | | | || |||||| |||| ||||||| ||||| |||||||| 
Sbjct: 310 ttctgggaacatcca-acttttcccagtgtactcataaacatttgtctttggtctcagga 368

                                                                       
Query: 193 tctttgggaatgtattcatgtgt-cctatgga-tgacaggaacattgctacaagtcccaa 250
           ||||| ||||||| ||||||||| || | | | || |||||||||||| ||| | |||||
Sbjct: 369 tctttaggaatgtcttcatgtgtgccaaag-actg-caggaacattgccacatgccccaa 426

                                                                       
Query: 251 agcctattggacattcctcaccaatacaagcatgtcaatcccctccaccatctatg--aa 308
           ||||| || | ||||||||||||| ||||||| |||||||||||||||||||| ||  ||
Sbjct: 427 agcctcttagccattcctcaccaacacaagcaagtcaatcccctccaccatctttgcaaa 486

                                                                       
Query: 309 aagaaactgtgacaact----tgtattcacaagcaactcttg---t-a--gcat------ 352
           |||   ||||| ||| |    ||||| |||||||||||||||   | |  ||||      
Sbjct: 487 aag---ctgtggcaaatgccctgtatccacaagcaactcttgagctgaatgcatcagcac 543

                                                                       
Query: 353 aaatctctccattgttctcaccatctactcaggtgaatggacaagcttacctcaat-caa 411
           |||| | | ||||   |||||||||||||||||||  ||||||||| | ||| ||| || 
Sbjct: 544 aaattttttcattacactcaccatctactcaggtgcctggacaagcctcccttaatgca- 602

                                                                       
Query: 412 gaatctactttgggacagcccatagctgcccagggagttcaacaacttttg--ttgtcca 469
           ||| | |||||||||||| |||||||||| | ||||||| || ||||||||  ||  | |
Sbjct: 603 gaaaccactttgggacagaccatagctgcacggggagttgaagaacttttgcctt--caa 660

                                                                       
Query: 470 gcccagg---------ttataaagaaagtgacaagcaggaaataggaatttttccatctt 520
            ||||||         ||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 661 acccagggactctaggttataaagaaagtgacaagcaggaactaggaatttttccatctg 720

                                                                       
Query: 521 accaagtacttctgggaatttccttacctgcagagggaa--tggtaggatcatgaccatc 578
            |||||| | |||||||||||| ||||||| ||| ||||  |  ||||||| ||  ||| 
Sbjct: 721 cccaagtgcctctgggaatttctttacctgtagaaggaactt--taggatcttggtcatt 778

                                                                       
Query: 579 tgtacaaagggttctgggaacttcccta-tctgtccaagagtctctgttcacacccaaac 637
           || |||| |||||||||||| | ||||| | || |||||||| ||||| |||| ||||||
Sbjct: 779 tgcacaaggggttctgggaaatcccctaat-tggccaagagtatctgtccacatccaaac 837

                        
Query: 638 aagaacctgtagg 650
           |||||||| ||||
Sbjct: 838 aagaacctatagg 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)