Query= MSMg01no125_o22.b1 MSMg01no125_o22.b1 CHROMAT_FILE:
MSMg01no125_o22.b1 PHD_FILE: MSMg01no125_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:07 2005
(596 letters)
>mm_chrX_46268189_46269185
Length = 997
Score = 1062 bits (549), Expect = 0.0
Identities = 582/593 (98%), Gaps = 2/593 (0%)
Strand = Plus / Plus
Query: 1 aaaa-gcaatctgagagcaaatgtttatgtcagtaacaagagcattgtgaactatatttt 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatgcaatctgagagcaaatgtttatgtcagtaacaagagcattgtgaactatatttt 260
Query: 60 gtcacctatatcaaatatcatgattgttggtattggtgatcttacatggttctgtaatgc 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gtcacctatatcaaatatcatgattgttggtattggtgatcttacatagttctgtaatgc 320
Query: 120 atcaagagttggtacctggctgagatgtgtgcatcttatttcttttttttttcattagat 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 atcaagagttggtacctggctgagatgtgtgcatcttatttc-tttttttttcattagat 379
Query: 180 attttcttcctttacatttcaaatgctatccccaaagctccctatacccttcccccatcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 attttcttcctttacatttcaaatgctatccccaaagctccctatacccttcccccaccc 439
Query: 240 tgctccccaacccactcactcccgcttcctggccctggcattcccctgtactggggcata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgctccccaacccactcactcccgcttcctggccctggcattcccctgtactggggcata 499
Query: 300 tgatcttcacaagaccaagggccaaagtgtggatacttcgctccttcttagattggggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgatcttcacaagaccaagggccaaagtgtggatacttcgctccttcttagattggggaa 559
Query: 360 caaaatacccatggaaggagttacagagacaaagttcggagctgagacagaaggaaggac 419
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 560 caaaacacccatggaaggagttacagagacaaagttcagagctgagacagaaggaaggac 619
Query: 420 catccagagactgctccacccagggatccatcccatatacaaccaccaaacccagacact 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 620 catccagagactgctccacccagggatccatcccatatacaactaccaaacccagacact 679
Query: 480 attgcatatgccaggaagattttgctgacaggaccctgatattgctctctcttgtgagtc 539
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 680 attgcatatgccaggaagattttgctgacaggaccctgatatagctgtctcttgtgagtc 739
Query: 540 tatgctaatgcctgacaaacacacaagtggatgctcacagtcatctattggat 592
||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 740 tatgctaatgcctgacaaacacagaagtggatgctcacagtcagctattggat 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_o22.g1 MSMg01no125_o22.g1 CHROMAT_FILE:
MSMg01no125_o22.g1 PHD_FILE: MSMg01no125_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:07 2005
(643 letters)
>mm_chrX_46467618_46468660
Length = 1043
Score = 600 bits (310), Expect = e-175
Identities = 310/310 (100%)
Strand = Plus / Minus
Query: 334 tacccaaaatgctagcacatataagtaagggctctgtgtaggcaccagcctgacttctcc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tacccaaaatgctagcacatataagtaagggctctgtgtaggcaccagcctgacttctcc 984
Query: 394 atgctcaatgagttgtgtaggtgttgtcctcagccctgtggccctggtgtcagtttgtgg 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 atgctcaatgagttgtgtaggtgttgtcctcagccctgtggccctggtgtcagtttgtgg 924
Query: 454 agagaaatataatcttagcaacaccctggcttgtttgggggttctcatgggactcttttg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 agagaaatataatcttagcaacaccctggcttgtttgggggttctcatgggactcttttg 864
Query: 514 gccaacaactccattagatgatatattctagactttatagatggttagaactataggact 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gccaacaactccattagatgatatattctagactttatagatggttagaactataggact 804
Query: 574 tggaacaagataattttcttattcacagtttgtctctcttgagttcctgccatttgaatg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tggaacaagataattttcttattcacagtttgtctctcttgagttcctgccatttgaatg 744
Query: 634 ttatattgtt 643
||||||||||
Sbjct: 743 ttatattgtt 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
