Query= MSMg01no125_p10.b1 MSMg01no125_p10.b1 CHROMAT_FILE:
MSMg01no125_p10.b1 PHD_FILE: MSMg01no125_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:10 2005
(478 letters)
>mm_chrX_162847625_162848502
Length = 878
Score = 903 bits (467), Expect = 0.0
Identities = 473/475 (99%)
Strand = Plus / Plus
Query: 1 aacccaatagcctatctctttctcataccacatgcagaaggtattctaacaaagagctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccaatagcctatctctttctcataccacatgcagaaggtattctaacaaagagctcg 260
Query: 61 ccaacctgtcagtgcggtccttggtttcatgtcatatgaacagcagcccatggcatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaacctgtcagtgcggtccttggtttcatgtcatatgaacagcagcccatggcatttaa 320
Query: 121 gctccagaaataaggttgatggtgctctccatctgggtcacccaaaggcccctttcgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccagaaataaggttgatggtgctctccatctgggtcacccaaaggcccctttcgtaa 380
Query: 181 agtgtgccttatgtagggtaatcataaaggataatgtactagaaactgggtcagaatgtt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 agtgtgccttatgtagggtaatcataaaggataatgtagtagaaactgggtcagaatgtt 440
Query: 241 aggactctcttataactaggggcttaggagagggagcaacttccagaggtacactgagta 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggactctcttagaactaggggcttaggagagggagcaacttccagaggtacactgagta 500
Query: 301 agcaaaggcacagagcactggtggaaggcaccaagaagggactatgagccctcttggttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaaaggcacagagcactggtggaaggcaccaagaagggactatgagccctcttggttg 560
Query: 361 agaatcacagtaggcaggcagtccagactgttgtacctggaggccaaggctaggaataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaatcacagtaggcaggcagtccagactgttgtacctggaggccaaggctaggaataga 620
Query: 421 aatgattacaattttaacctcttctccctgccttgctccaagtgcttactggcct 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatgattacaattttaacctcttctccctgccttgctccaagtgcttactggcct 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_p10.g1 MSMg01no125_p10.g1 CHROMAT_FILE:
MSMg01no125_p10.g1 PHD_FILE: MSMg01no125_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:10 2005
(352 letters)
>mm_chrX_163013655_163014407
Length = 753
Score = 582 bits (301), Expect = e-170
Identities = 340/357 (95%), Gaps = 9/357 (2%)
Strand = Plus / Minus
Query: 1 ttctgggcaattcaacatttagctcaaaattctctctgcttggggcctgctatccactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 553 ttctgggcaattcaacatttagctcaaaattctctctgcttggggcctgttatccactaa 494
Query: 61 aacttgacattccactgcctcaagactggattccctgggtcccctgggtcccctgggtct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gacttgacattccactgcctcaagactggattccctgggtcccctgggtcccctgggtct 434
Query: 121 tatatctgctaaacactgtttaggaagagagagaaatggagaggtacagaaagggaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatatctgctaaacactgtttaggaagagagagaaatggagaggtacagaaagggaggaa 374
Query: 181 gaggagaatggagggacagaggtta-ggggacagcatgcccatccaggtgtcccaaggta 239
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 373 gaggagaatggagggacagaggttagggggacagcatgcccatccaggtgtcccaaggca 314
Query: 240 gaaactttttttt----tcacagacagtggacattttaaatgtacagaaagcaatttctg 295
||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaaac----atctgaagtcacagacagtggacattttaaatgtacagaaagcaatttctg 258
Query: 296 cgtaaaatgctttccgtacaagtggtgaaaacatcttaatgtcaaactctggcttca 352
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 257 ggtaaaatgctttccgtacaagtggggaagacatcttaatgtcaaactctggcttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 753
Length adjustment: 9
Effective length of query: 343
Effective length of database: 744
Effective search space: 255192
Effective search space used: 255192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
