Query= MSMg01no133_p15.b1 MSMg01no133_p15.b1 CHROMAT_FILE:
MSMg01no133_p15.b1 PHD_FILE: MSMg01no133_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:56 2005
(672 letters)
>mm_chrX_40316182_40317253
Length = 1072
Score = 1253 bits (648), Expect = 0.0
Identities = 663/668 (99%), Gaps = 1/668 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgtttgccacattttcgattttgattggtgttttcaggagtccaactatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgtttgccacattttcgattttgattggtgttttcaggagtccaactatgat 264
Query: 65 catttgatgtgttatgaaaacaacattttgaccaacatgttaaaaactgaaataaaacag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catttgatgtgttatgaaaacaacattttgaccaacatgttaaaaactgaaataaaacag 324
Query: 125 tatatatggtagagcatcacaatgagtaaaggaataaattgttccatgaaactttggttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatatatggtagagcatcacaatgagtaaaggaataaattgttccatgaaactttggttt 384
Query: 185 tagttttgtatagtatgatttaaaatctgattctaaatgtagaatatagtgagacgaata 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 385 tagttttgtatagtatgatttaaaatctgattctaaatgtggaatatagtgagacaaata 444
Query: 245 aattgtaaaacattgatctacaatctggtcaaatgattgatatgtcaagttgtttatcat 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aattgtaaaacattgatttacaatctggtcaaatgattgatatgtcaagttgtttatcat 504
Query: 305 gctactggttttaactgtaaaacaattgtggattaaaatgatatacttttgcatatcatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctactggttttaactgtaaaacaattgtggattaaaatgatatacttttgcatatcatt 564
Query: 365 agttaagtattaattatgtggggagtttcattgtttgaataatttttatttttgctattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agttaagtattaattatgtggggagtttcattgtttgaataatttttatttttgctattt 624
Query: 425 ttttggttaagattataattacatcatttcaccttccaaaccctcctaaatagccctgtt 484
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 ttt-ggttaagattataattacatcatttcaccttccaaaccctcccaaatagccctgtt 683
Query: 485 caaattcatggcccctttttaaaaacaatgttgtgacatgaatatatgtatatacatatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 caaattcatggcccctttttaaaaacaatgttgtgacatgaatatatgtatatacatatt 743
Query: 545 cataagtataaccagatcagtctgaataatgttacttgtatgtatattttcagacctgat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cataagtataaccagatcagtctgaataatgttacttgtatgtatattttcagacctgat 803
Query: 605 catattgtatcagaagtcaattgatgtacttttccctgatgaagactatttctcctctct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 catattgtatcagaagtcaattgatgtacttttccctgatgaagactatttctcctctct 863
Query: 665 cagcatca 672
||||||||
Sbjct: 864 cagcatca 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_p15.g1 MSMg01no133_p15.g1 CHROMAT_FILE:
MSMg01no133_p15.g1 PHD_FILE: MSMg01no133_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:56 2005
(338 letters)
>mm_chrX_40373016_40373753
Length = 738
Score = 644 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Minus
Query: 1 attcactctagaattaatactttagtagactgaagccagtgagaagctcagaaaaaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 attcactctagaattaatactttagtagactgaagccagtgagaagctcagaaaaaataa 478
Query: 61 tctatgaagctcacaagtcatacaattagcaaactagtatcagtacaggaaggattagaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 477 tctatgaagctcacaagtcatacagttagcaaactagtatcagtacaggaaggattagaa 418
Query: 121 tcaacagcaagtccaaaatagagtaaatttgaattagaataaataaccaaactcagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcaacagcaagtccaaaatagagtaaatttgaattagaataaataaccaaactcagaaat 358
Query: 181 ccaaaacaagtagaaagttatgatcaaatagcaattagctaggagcccatgaggatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccaaaacaagtagaaagttatgatcaaatagcaattagctaggagcccatgaggatacac 298
Query: 241 tcagttttcttaaggaagtcatttcatttatctgaccttcaatgacatcatctataagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcagttttcttaaggaagtcatttcatttatctgaccttcaatgacatcatctataagta 238
Query: 301 caaagattttcttattagcaaaagctgttttggaatt 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 caaagattttcttattagcaaaagctgttttggaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
