XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGGACCGCGGATTCTC
ACCTGATGACACGGAATGGCTGAGAAGTGCCTGATAAAATGTTCAGTATC
CTTAATCATCAGGGAAATGCAAATCAAAACAAACCTGAGATTCCACCTCA
CACCAGTCTGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGG
CGAGGATGTGGAGAAGGAGGAACACTCCTCCATTGTTGGTGGGATTGCAA
GCTTGTACGACCACTGTGGAAATCATTCTGGTGGTTGCTCAGGAAATTGG
ACATAGTACTACCAGAGGATGCCGCAATACTGTGGGCATGTAAATGTGTG
TTTCTCTAGCGTACAGTGATGGCAGTGTGAATGTGACTGTGTGTTTCTCT
AGAGTGTAGGAAGCCTTTTGGTATGTGAAAATGTTTTTTTGTAGAGTGAG
GACAGCAATGGGCATTTCTATGTGTTTTTCTGTAAAGTGCAGTCTGCAGA
CTCTTATGAATAATTGTTTCTGTAGAGTGCATTGATGGCAGTGGACATGT
GAATGTGTGTTTCTATTGGGGGCATGATAGCAGTGGGCATTAACATGTGT
GTTTCAGTATTGTGTAGTATAGCAGCGGGCCTGTGAACGTGTGTTCCTGT
AGAGCGCTGGATATCTGAAGTCATGCTAATGTTTGTTTCTGCATAGTTCA
TTGTTGGCATCTGATGTATGTACAT

GATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGA
GATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCT
GGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTG
GCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTC
TGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGA
TTTTGTTACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCTGAG
TTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAA
GGTGTACAGTTATCTGGCGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGC
CCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGG
CCAGTTGTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCTGTGGCTCT
TGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAGGATGGTGCCGCCCCAGA
ATCTCTGCGACTCTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATTC
CACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAA
GGCTCCCGCCGGCGCCTGTGCCATAAT

Query= MSMg01no139_k21.b1 MSMg01no139_k21.b1 CHROMAT_FILE:
MSMg01no139_k21.b1 PHD_FILE: MSMg01no139_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:09 2005
         (566 letters)



>mm_chrX_4751213_4752178
          Length = 966

 Score = 1011 bits (523), Expect = 0.0
 Identities = 556/567 (98%), Gaps = 1/567 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcacctgatgac-acggaatggctgagaagtgcctgataaaatgttcagtatccttaat 59
           ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctcacctgaggaatacggaatggctgagaagtgcctgataaaatgttcagtatccttaat 259

                                                                       
Query: 60  catcagggaaatgcaaatcaaaacaaacctgagattccacctcacaccagtctgaatggc 119
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 catcagggaaatgcaaatcaaaacaaacctgagattccacctcacagcagtctgaatggc 319

                                                                       
Query: 120 taagatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaggaggaacact 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taagatcaaaaattcaggtgacagcagatgctggcgaggatgtggagaaggaggaacact 379

                                                                       
Query: 180 cctccattgttggtgggattgcaagcttgtacgaccactgtggaaatcattctggtggtt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 380 cctccattgttggtgggattgcaagcttgtacgaccactgtggaaatcattcaagtggtt 439

                                                                       
Query: 240 gctcaggaaattggacatagtactaccagaggatgccgcaatactgtgggcatgtaaatg 299
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 cctcaggaaattggacatagtactaccagaggatgccacaatactgtgggcatgtaaatg 499

                                                                       
Query: 300 tgtgtttctctagcgtacagtgatggcagtgtgaatgtgactgtgtgtttctctagagtg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtgtttctctagcgtacagtgatggcagtgtgaatgtgactgtgtgtttctctagagtg 559

                                                                       
Query: 360 taggaagccttttggtatgtgaaaatgtttttttgtagagtgaggacagcaatgggcatt 419
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taggaagtcttttggtatgtgaaaatgtttttttgtagagtgaggacagcaatgggcatt 619

                                                                       
Query: 420 tctatgtgtttttctgtaaagtgcagtctgcagactcttatgaataattgtttctgtaga 479
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctatgtgtttttctgtacagtgcagtctgcagactcttatgaataattgtttctgtaga 679

                                                                       
Query: 480 gtgcattgatggcagtggacatgtgaatgtgtgtttctattgggggcatgatagcagtgg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtgcattgatggcagtggacatgtgaatgtgtgtttctattgggggcatgatagcagtgg 739

                                      
Query: 540 gcattaacatgtgtgtttcagtattgt 566
           ||||| |||||||||||||||||||||
Sbjct: 740 gcattgacatgtgtgtttcagtattgt 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space:   531536
Effective search space used:   531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)