Query= MSMg01no140_k14.b1 MSMg01no140_k14.b1 CHROMAT_FILE:
MSMg01no140_k14.b1 PHD_FILE: MSMg01no140_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:27 2005
(416 letters)
>mm_chrX_34113753_34114568
Length = 816
Score = 708 bits (366), Expect = 0.0
Identities = 387/394 (98%)
Strand = Plus / Plus
Query: 23 agcgaccattcaatgggctgctcaaaagagaaaatgattacaacgagccttactcatctc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 agcgaccattcaatgggctgctcaaaagagaaaatgattacaacgagccttactcatctc 282
Query: 83 cagggttcctgaacctgcactccaaactattgagtttgcttcaccacagaatgtatcttc 142
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagggttcctgaacctgcactacaaactattgagtttgcttcaccacagaatgtatcttc 342
Query: 143 cttatgaaacaatttgcaaaacacatgaaactcaagaagaacaaagatgaaagtgtggac 202
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 343 cttatgaaacaatttgcaaaacacatgaaactcaagaacaacgaagatgaaagtgtggac 402
Query: 203 actttgctccttcttagaattgggaacaaaacatccatggaaggagttacagagataaag 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 actttgctccttcttagaattgggaacaaaacatccatggaaggagttacagagataaag 462
Query: 263 attggagctgagactaaaggatggaccatctagagactgccatacccagggatccatccc 322
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attggagctgagacgaaaggatggaccatctagagactgccatacccagggatccatccc 522
Query: 323 ataatcagcctccaaacgctgacaccattgcacacactagcaagattttgctgaaaggac 382
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ataatcagcccccaaacgctgacaccattgcacacactagcaagattttgctgaaaggac 582
Query: 383 cctgatatagctgtctctttcgaggctatgctgg 416
|||||||||||||||||||| |||| ||||||||
Sbjct: 583 cctgatatagctgtctcttttgaggatatgctgg 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_k14.g1 MSMg01no140_k14.g1 CHROMAT_FILE:
MSMg01no140_k14.g1 PHD_FILE: MSMg01no140_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:27 2005
(324 letters)
>mm_chrX_34264216_34264945
Length = 730
Score = 569 bits (294), Expect = e-166
Identities = 319/330 (96%), Gaps = 6/330 (1%)
Strand = Plus / Minus
Query: 1 ttggacctgtttatagacagccattgttaaattagctggaccatatcctgtaagtcattc 60
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 670 ttggacctgtttataggcagccattgttaaattagctggaccatagcctgtaagtcattc 611
Query: 61 taataaatcccctttctatatatagaggaatattgatactataagttctgttgctctaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 taataaatcccctttctatatatagaggaatattgatactataagttctgttgctctaga 551
Query: 121 aaaccattgtgactactacatatacgaaagctatttttagctcacagtttgaataaaggt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 550 aaaccattgtgactactacatatatgaaagctatttttagctcacagtttgaataaaggt 491
Query: 181 ggtaaaatagattcagactgtgagttgttctaatag-ttttatcactcctgagctaagaa 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 490 ggtaaaatagattcagactgtgagttgttctaatagtttttatcactcctgagctaagaa 431
Query: 240 ttggtgtgtttttctttggctaaa-----ccttctatggacttttatgaaatttcatgtc 294
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 430 ttggtgtgtttttctttggttaaaccttcccttctatggacttttatgaaatttcatgtc 371
Query: 295 tcataggaatctggagactagtcttttcaa 324
||| ||||||||||||||||||||||||||
Sbjct: 370 tcacaggaatctggagactagtcttttcaa 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 730
Length adjustment: 9
Effective length of query: 315
Effective length of database: 721
Effective search space: 227115
Effective search space used: 227115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
