Query= MSMg01no143_a18.b1 MSMg01no143_a18.b1 CHROMAT_FILE:
MSMg01no143_a18.b1 PHD_FILE: MSMg01no143_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:28 2005
(620 letters)
>mm_chrX_165682531_165683550
Length = 1020
Score = 1023 bits (529), Expect = 0.0
Identities = 549/565 (97%), Gaps = 15/565 (2%)
Strand = Plus / Minus
Query: 71 tatatatatacagttattgtctatcaatccatgtgcattcatgtacccagagataaacaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tatatatatacagttattgtctatcaatccatgtgcattcatgtacccagagataaacaa 961
Query: 131 tttattagtagcattttagatttatatggaaagtattaatattcaattaagtacattatt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tttattagtagcattttagatttatatggaaagtattaatattcaattaagtacattatt 901
Query: 191 cttgttagactcaaaattacatctcttagcagcctcagcaaattggaacctaggagagcc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cttgttagactcaaaattacatctcttagcagcctcagcaaattggaacctaggagagcc 841
Query: 251 ctgttttttt---------------ttttttttaagccctgcaattgaaactgcaatgat 295
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 840 ctgttttttttttttttttgttttgttttttttaagccctgcaattgaaactgcaatgat 781
Query: 296 caagggaaaataactctaaggttatttgttcttttagcaaaaagctaacattaaaccagg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 caagggaaaataactctaaggttatttgttcttttagcaaaaagctaacattaaaccagg 721
Query: 356 tggaaagagcctttaaaaggctttcctgcttgatccatggtaacattttaaactaggcta 415
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tggaaagagcctttaaaaggttttcctgcttgatccatggtaacattttaaactaggcta 661
Query: 416 atagccaagtctccattaagaacagaaatggtacttgaaagtcgtatacctctgatccca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atagccaagtctccattaagaacagaaatggtacttgaaagtcgtatacctctgatccca 601
Query: 476 tcaaaaggtgcaacttgttttgaagtaaaatatcctaagttcatctggggatttttttcc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcaaaaggtgcaacttgttttgaagtaaaatatcctaagttcatctggggatttttttcc 541
Query: 536 aaagagcttgctctatcagtgaactatggggcatatgccaatcaaaagtgttatgccttt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaagagcttgctctatcagtgaactatggggcatatgccaatcaaaagtgttatgccttt 481
Query: 596 cttttttgaggtaagactattacta 620
|||||||||||||||||||||||||
Sbjct: 480 cttttttgaggtaagactattacta 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_a18.g1 MSMg01no143_a18.g1 CHROMAT_FILE:
MSMg01no143_a18.g1 PHD_FILE: MSMg01no143_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:29 2005
(462 letters)
>mm_chrX_165530956_165531817
Length = 862
Score = 878 bits (454), Expect = 0.0
Identities = 460/462 (99%)
Strand = Plus / Plus
Query: 1 ctggtcttctgatttcacccttcctgaaaatgtttttgattgattgattgtacatgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtcttctgatttcacccttcctgaaaatgtttttgattgattgattgtacatgggaa 260
Query: 61 agaaggaaggtagatacatgtatctaatctgacatcttgacttaaaaatactgattttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaggaaggtagatacatgtatctaatctgacatcttgacttaaaaatactgattttca 320
Query: 121 taactttttcaccttataaaaattaattgctcatcctaatcaactgatttagttatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactttttcaccttataaaaattaattgctcatcctaatcaactgatttagttatcatc 380
Query: 181 ttcatgatactagtagcattaataaaactgtattaacatttctttatattattttcctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatgatactagtagcattaataaaactgtattaacatttctttatattattttcctca 440
Query: 241 ttttctttatcctttaattttaatgttgtatattaagtagaaaaacaatttcttttaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttctttatcctttaattttaatgttgtatattaagtagaaaaacaatttcttttaata 500
Query: 301 tttaaagagaataacaatatgattgcatataaatattcactataacaatttaaaacatat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tttaaagagaataacaatatgattgcatataaatattcactataagaatttaaaacatat 560
Query: 361 tttttaacagaatcatctgtttagatatttgggtccaggaagaaagtttaagagagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttaacagaatcatctgtttagatatttgggtccaggaagaaagtttaagagagagaa 620
Query: 421 aggacacagtggtgggaagagagagataaggcaatgagtttt 462
||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 aggacacagtggtgggaggagagagataaggcaatgagtttt 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
