Query= MSMg01no143_e07.b1 MSMg01no143_e07.b1 CHROMAT_FILE:
MSMg01no143_e07.b1 PHD_FILE: MSMg01no143_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:47 2005
(367 letters)
>mm_chrX_117796271_117797037
Length = 767
Score = 688 bits (356), Expect = 0.0
Identities = 362/364 (99%)
Strand = Plus / Minus
Query: 4 gaattcttatcttatcttcattctcctgactatgcaatgaaagatcaactttaaagcaca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattcttatcttattttcattctcctgactatgcaatgaaagatcaactttaaagcaca 508
Query: 64 agctagataatcaagagatataggagacatagtgatcattgtaaatattttataaacata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agctagataatcaagagatataggagacatagtgatcattgtaaatattttataaacata 448
Query: 124 ccatcaaaacctttatctatttacacagaatatcatatgtaaacatttataaaacattgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccatcaaaacctttatctatttacacagaatatcatatgtaaacatttataaaacattgt 388
Query: 184 ggcaaaatgttattataaaatttcacctttaaccgaaaagtacatttaaaataactttgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggcaaaatgttattataaaatttcacctttaaccgaaaagtacatttaaaataactttgc 328
Query: 244 tgtacaacatttcagtagatgctttttgttattcattgtaagtgtgattttcacaccatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgtacaacatttcagtagatgctttttgttattcattgtaagtgtgattttcacaccatt 268
Query: 304 tggaaaaatcaagagtgttgccctcctccattaacagatggagtgttattgatctgatgt 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tggaaaaatcaagagtgttggcctcctccattaacagatggagtgttattgatctgatgt 208
Query: 364 agat 367
||||
Sbjct: 207 agat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_e07.g1 MSMg01no143_e07.g1 CHROMAT_FILE:
MSMg01no143_e07.g1 PHD_FILE: MSMg01no143_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:47 2005
(215 letters)
>mm_chrX_117669214_117669829
Length = 616
Score = 397 bits (205), Expect = e-115
Identities = 214/217 (98%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 1 tcttttgtg-atactaattcaaatgaatattatgatcttcctgaggtaaatcttgtttgc 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttttgtgtatactaattcaaatgaatattatgatcttcctgaggtaaatcttgtttgc 260
Query: 60 atttctttaatataaaggaagtataatagaggtaggaacataatactgtaatttcaagat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttctttaatataaaggaagtataatagaggtaggaacataatactgtaatttcaagat 320
Query: 120 tgcatgcaaaaaa-caaacaaatatttcgggggaggtgataggttgtacatgtaattatt 178
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatgcaaaaaaacaaacaaatattt-gggggaggtgataggttgtacatgtaattatt 379
Query: 179 cagtcaacaatttcttttgatttccaaattataggca 215
|||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtcaacaatttcttttgatttccaaattataggca 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 616
Length adjustment: 9
Effective length of query: 206
Effective length of database: 607
Effective search space: 125042
Effective search space used: 125042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
