Query= MSMg01no143_i09.b1 MSMg01no143_i09.b1 CHROMAT_FILE:
MSMg01no143_i09.b1 PHD_FILE: MSMg01no143_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:06 2005
(566 letters)
>mm_chrX_112140302_112141267
Length = 966
Score = 1048 bits (542), Expect = 0.0
Identities = 557/562 (99%)
Strand = Plus / Minus
Query: 5 gaattcactgtgtgtgtccaatacttttctattttttgtaatgaaataagcacttgtcca 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattcactgtgtgtgttgaatacttttctattttttgtaatgaaataagcacttgtcca 707
Query: 65 tcaaactatagctttacttcttactttgattatagttttggaaacatatctcatgaagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tcaaactatagctttacttcttactttgattatagttttggaaacatatctcatgaagta 647
Query: 125 ggattcgttacactaagttcattcaactcaccagatgattaaaaacctaatatgataaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggattcgttacactaagttcattcaactcaccagatgattaaaaacctaatatgataaag 587
Query: 185 agaaaggatggatagtatatattttgtttttcttggccctcagttcacatgtggaaatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agaaaggatggatagtatatattttgtttttcttggccctcagttcacatgtggaaatct 527
Query: 245 taacctctgaggtaataggattttctggtagagcttttgggagaattttatgctaccatg 304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 526 taacctctgaggtaataggatttactggtagagcttttgggagaattttatgctaccatg 467
Query: 305 gtagagcttaatgaatgatattaatgaggttataaatgagttcccagaaatctcataaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtagagcttaatgaatgatattaatgaggttataaatgagttcccagaaatctcataaat 407
Query: 365 gcccctgtatcacacaagatcacagggaaaagaaaaacaactacaacaacaacaaaacca 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcccctgtatcatacaagatcacagggaaaagaaaaacaactacaacaacaacaaaacca 347
Query: 425 caaaaccacagcagctttccaggaatcaacaagcaaaccttttccttaacaccacatttg 484
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 346 caaaaccacagcagctttccaggaatcaccaagcaaaccttttccttaacaccacatttg 287
Query: 485 ctcatggtttcatctatgcttctaagcatcctgaacaagtaactttctgttgctagtaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcatggtttcatctatgcttctaagcatcctgaacaagtaactttctgttgctagtaaa 227
Query: 545 tgactggcattatagtgattga 566
||||||||||||||||||||||
Sbjct: 226 tgactggcattatagtgattga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_i09.g1 MSMg01no143_i09.g1 CHROMAT_FILE:
MSMg01no143_i09.g1 PHD_FILE: MSMg01no143_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:06 2005
(349 letters)
>mm_chrX_112062128_112062877
Length = 750
Score = 549 bits (284), Expect = e-161
Identities = 327/344 (95%), Gaps = 6/344 (1%)
Strand = Plus / Plus
Query: 1 ctgaagattcccattattcctggtccttatggagactgatctaaaaacaaaaaaaaaaaa 60
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 206 ctgaagattcccattactcctggtccttatggagactgattta-----aaaaaaaaaaaa 260
Query: 61 aagtaataaaattaaagtgggaagctataatctcccaagtaagaaaaaatgtaggactcc 120
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtaataaaatgaaagtgggaagctataatctcccaagtaagaaaaaatgtaggactcc 320
Query: 121 ctagctgcccaggcccacagtcttctcctggtcccacactgaggcctgctgtgaacttcc 180
| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 321 cgagctgcccaggcccacagtctcctcctggtcccacgctgaggcctgctgtgaacttcc 380
Query: 181 ccggtgcagaattagcctcaggctccgcctgcacggtggtgaagattggaataattggtg 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccggtgcagacttagcctcaggctccgcctgcacggtggtgaagattggaataattggtg 440
Query: 241 aaaattttagaggaagaactgaaaactatgtggatactccattttgcaagccatttgacg 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 gaaattttagaggaagaactgaaaactatgtggatactccattttgcaagacatttgacg 500
Query: 301 ccttaatttgggggaagataaa-gaacactgattgtgtacttct 343
|||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 501 ccttaatttgggggaagaaaaaagaacactgattgtgtacttct 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 750
Length adjustment: 9
Effective length of query: 340
Effective length of database: 741
Effective search space: 251940
Effective search space used: 251940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
