CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCAGAGAATCCGCGGA
ATTCTATTGCTTATGCTGACAGGTGAAAGACAGAAGGCACAATTTCCTGG
GTTTTTATTTAAGATGTATTTTGAATGTACCCTCCACAAAGAGTGTCCCA
GGCTGCATTAATTTTTATAAGATTTTTTTATTCCCAACTTGAGGCAGAAT
GAGCTTGTTGATGAAAACAAGTCAGAAGTCAAGAACGCCTTCATACAACA
TGAACAAACACGCAACGGCTGGAAGATTGGGACAACATGGCAGAGTGAAA
TTTGGGAAACAGCCTTTACCTCTAAGTTAAAGCCCATCAACCATGAGGGG
GCAAGCAATCCTAGTACCAACTGGAAGTGTGGCATTTGTATTCAGTGTCC
ACCTCTAAATAATTCCGACCCCCACACTAAAACCTAAATGCAAGATAGTG
CAACAATTGGAGTAAGGGTGAAGGAGGTCTGGCTTTGTGTGCTCTCTGAA
TTGTGACGTCCTAGATCCCCATTACCATTGCGTGTCTAGAATCTATCCCT
TTTTCTGACTACCCGCCCCGAATTCTATCACGCCCCCTAAAATTACTACC
ATTTGTGCCCCCCCTTTATATTTTAAAACCCCCCTCTCTTTATAATCCCC
CCCTTTTTCTACCTCTCCTTTATTCCCCGTGCTATTTCATTCCTTTTG

ATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTACTGTGTGCCAGATAATGGTTGGAAATGGAT
GAAACCCTCTCTGCTCTTTTAGAAAATACTTAATTTTTTTATTTTAATTA
TGCATGATGATATGCTCACTTGAGTGCTGGTCCACAGACCAGAGGTGTCA
GAACCCCTGGCACTGGAGTTACAAGTGTTTGTGAGCCATCTGATGTGGGG
TATGGGAACTGAACTCAGGTCCTTTGGAAAATCAGTACGCACTCTTTAAC
CTCTGATCCATCTCTCCAGCTCCACTCTCTGTTTATTTTTTTTTAATTTA
TTTATTTTTTCATGCGAGTACACTGTGGATGTCTTCAGACAGAACAGAAT
AGGGTGCCACCCCCTCTCACAGATGGTTGTGAACCACCATGTGCATATCG
TTAATTGATTTCACTCTTCTTTTGATTATCATCCCGCGCACCCAATTGTT
GATTCATCTCTACCCCCTCGCACCTCATGTTCCTAAGACTATTCCCTATA
CTCTCTTAGTTATTCTCCTTCTGTCCCCACCTTCTCATATTATTTCCATT
CCTTCCTCTTTTTCTCCCAGTTTCGTATATAATACCTTTCGCCTCTATCT
TCATCTTCCTTATTCTCTACTTTCTACCTCGCTCCGTTAACTCCTA

Query= MSMg01no143_o15.b1 MSMg01no143_o15.b1 CHROMAT_FILE:
MSMg01no143_o15.b1 PHD_FILE: MSMg01no143_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:35 2005
         (373 letters)



>mm_chrX_48912476_48913248
          Length = 773

 Score =  706 bits (365), Expect = 0.0
 Identities = 368/369 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctattgcttatgctgacaggtgaaagacagaaggcacaatttcctgggtttttat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctattgcttatgctgacaggtgaaagacagaaggcacaatttcctgggtttttat 264

                                                                       
Query: 65  ttaagatgtattttgaatgtaccctccacaaagagtgtcccaggctgcattaatttttat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaagatgtattttgaatgtaccctccacaaagagtgtcccaggctgcattaatttttat 324

                                                                       
Query: 125 aagatttttttattcccaacttgaggcagaatgagcttgttgatgaaaacaagtcagaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagatttttttattcccaacttgaggcagaatgagcttgttgatgaaaacaagtcagaag 384

                                                                       
Query: 185 tcaagaacgccttcatacaacatgaacaaacacgcaacggctggaagattgggacaacat 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaagaacgccttcatgcaacatgaacaaacacgcaacggctggaagattgggacaacat 444

                                                                       
Query: 245 ggcagagtgaaatttgggaaacagcctttacctctaagttaaagcccatcaaccatgagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggcagagtgaaatttgggaaacagcctttacctctaagttaaagcccatcaaccatgagg 504

                                                                       
Query: 305 gggcaagcaatcctagtaccaactggaagtgtggcatttgtattcagtgtccacctctaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggcaagcaatcctagtaccaactggaagtgtggcatttgtattcagtgtccacctctaa 564

                    
Query: 365 ataattccg 373
           |||||||||
Sbjct: 565 ataattccg 573


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space:   278096
Effective search space used:   278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)