Query= MSMg01no147_b03.b1 MSMg01no147_b03.b1 CHROMAT_FILE:
MSMg01no147_b03.b1 PHD_FILE: MSMg01no147_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:33 2005
(227 letters)
>mm_chrX_12519514_12520147
Length = 634
Score = 350 bits (181), Expect = e-101
Identities = 214/225 (95%), Gaps = 7/225 (3%)
Strand = Plus / Plus
Query: 10 gaattcaatgacctcctg-ctc-gcctcctgattgct-ggattccagggatgcctccaca 66
|||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 210 gaattcaatgacctcctgcctcagcctcctgattgctgggattccagggatgcctccaca 269
Query: 67 cccagctcccttttg-cttga-atagt-gagccccaggacagtgcaaaggtgattcagac 123
||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 270 cccagctcccttttgccttgagatagtggagccccaggacagggcaaaggtgattcagac 329
Query: 124 aggtctcatgaacccctcaccttatttccatatagttaccggtagtttgagaaaccgaga 183
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 330 aggtctcatgaacccctcaccttatttccctatagttactggtagtttgagaaaccggga 389
Query: 184 agttaacactggcgaaagccatgtggatagttctgtcata-tgtc 227
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 390 agttaacactggcgaaagccatgtggatagttctgtcatactgtc 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 634
Length adjustment: 9
Effective length of query: 218
Effective length of database: 625
Effective search space: 136250
Effective search space used: 136250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no147_b03.g1 MSMg01no147_b03.g1 CHROMAT_FILE:
MSMg01no147_b03.g1 PHD_FILE: MSMg01no147_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:33 2005
(429 letters)
>mm_chrX_12613590_12614418
Length = 829
Score = 588 bits (304), Expect = e-172
Identities = 317/324 (97%), Gaps = 5/324 (1%)
Strand = Plus / Minus
Query: 1 agggcatcaggcttgtgccattgccccactgaaccatcagcccccattttctatttagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agggcatcaggcttgtgccattgccccactgaaccatcagcccccattttctatttagtt 260
Query: 61 gctttcagttggcaacttcactccaggtttaatatgttcttattctagctttttatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gctttcagttggcaacttcactccaggtttaatatgttcttattctagctttttatttat 200
Query: 121 ttttatttttttttgagattataatataattaatccttctcctcttccctttcctccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 -----tttttttttgagattataatataattaatccttctcctcttccctttcctccttt 145
Query: 181 caaccccaccctcccattgctgctctctttcaaattcatgtccttcttttctttaattgt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 caactccaccctcccattgctgctctctttcaaattcatgtccttcttttctttaattgt 85
Query: 241 tggtaatgtgccctgcagtggtggcgcacgcctttaaccccagcacttgggaggcagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tggtaatgtgccctgcagtggtggcgcacgcctttaaccccagcacttgggaggcagagg 25
Query: 301 caggcggatttctgagttggaggc 324
||||||||||||||||||||||||
Sbjct: 24 caggcggatttctgagttggaggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
