Query= MSMg01no147_o02.b1 MSMg01no147_o02.b1 CHROMAT_FILE:
MSMg01no147_o02.b1 PHD_FILE: MSMg01no147_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:36 2005
(639 letters)
>mm_chrX_163818353_163819391
Length = 1039
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 5 gaattcccacttctctggcttcttctacc-aagggctgagaacgtagtgtgtgccagcat 63
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 gaattcccacttctctggcttcttctacccaagggctgagaacgtagtgtgtgccagcat 263
Query: 64 atcctgatctgatgctgcacaggggcttcatgcaaactcctgcaagcaactctaccaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcctgatctgatgctgcacaggggcttcatgcaaactcctgcaagcaactctaccaact 323
Query: 124 gaactacattccccaaccccagagtggcattcttttgttgttgttgttgtttttaactta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaactacattccccaaccccagagtggcattcttttgttgttgttgttgtttttaactta 383
Query: 184 tgaaaataaatttttcactgttcttaattcaatgtcacagttcatttcattgctgttttc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 tgaaaataaatttttcactgttcttaattcaatgtcacagttcatttcattgttgttttc 443
Query: 244 ttgttgccgactcctggaaggtttggattatttccttttgttcccccattaattaattta 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 ttgttgccgactcctggaaggtttggattacttccttttgttcccccattaattaattta 503
Query: 304 ttttagggggtggcttggaggaggggggacttcaatcaggatgtaatgtcaataagtaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttagggggtggcttggaggaggggggacttcaatcaggatgtaatgtcaataagtaaa 563
Query: 364 caaagtggcagttctttcgcctgaattgtccacaggtttcttctattatcacccaagctg 423
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaagtggcagttctttcacctgaattgtccacaggtttcttctattatcacccaagctg 623
Query: 424 tgtaaatggagtttaccacctagaaaaggtcacacgggattcacataacctctagaaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtaaatggagtttaccacctagaaaaggtcacacgggattcacataacctctagaaaaa 683
Query: 484 aatcatctttgtcatcaatattaatctaactgggtctgatgacacacacacccgaaattc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatcatctttgtcatcaatattaatctaactgggtctgatgacacacacacccgaaattc 743
Query: 544 taatgcttgggaggtagaaacaagggttctcctgtgagttcgaagcctacctggactact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taatgcttgggaggtagaaacaagggttctcctgtgagttcgaagcctacctggactact 803
Query: 604 acctgggtgagttcaataccagcctaaacacatagc 639
|||||||||||||||||||||||||||| |||||||
Sbjct: 804 acctgggtgagttcaataccagcctaaatacatagc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_o02.g1 MSMg01no147_o02.g1 CHROMAT_FILE:
MSMg01no147_o02.g1 PHD_FILE: MSMg01no147_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:36 2005
(286 letters)
>mm_chrX_163965714_163966399
Length = 686
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Minus
Query: 1 agttatgttgtttgtttattgacatctaagatgagcaatgagcgtctttgtccaatgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agttatgttgtttgtttattgacatctaagatgagcaatgagcgtctttgtccaatgtct 397
Query: 61 cctttactcccaagaacagatgtactacatacatcagctcccttgaccagagtcaatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cctttactcccaagaacagatgtactacatacatcagctcccttgaccagagtcaatgaa 337
Query: 121 tacatatgctcatactgagtgctgtttgaaaggaaagcagtccttgactccatctattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tacatatgctcatactgagtgctgtttgaaaggaaagcagtccttgactccatctattgt 277
Query: 181 tccatctactctcccatcccttactgcatatattgtctgatgagttgcaatgatctttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tccatctactctcccatcccttactgcatatattgtctgatgagttgcaatgatctttga 217
Query: 241 aaatattttatttagggtgtgtgtgtgtgtgtgtgtgtgtgtgt 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aaatattttatttagggtgtgtgtgtgtgtgtgtgtgtgtgtgt 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
